RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 OR1A1Q9P1Q5 309 aa10.48□□□□□ -0.73
SSB-203ENST00000413002 ELF5Q9UKW6 265 aaPredicted RBP10.48□□□□□ -0.73
SSB-203ENST00000413002 HSF4Q9ULV5 492 aa10.48□□□□□ -0.73
SSB-203ENST00000413002 RAB27BO00194 218 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 IL3RAP26951 378 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 VDAC2P45880 294 aaPredicted RBP10.47□□□□□ -0.73
SSB-203ENST00000413002 OR3A3P47888 321 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 LSM3P62310 102 aaKnown RBP10.47□□□□□ -0.73
SSB-203ENST00000413002 HTD2P86397 168 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 PRR31Q5SQ13 230 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 SFXN4Q6P4A7 337 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 ZNF554Q86TJ5 538 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 OR8H3Q8N146 312 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 AKR1E2Q96JD6 320 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 ABHD14AQ9BUJ0 271 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 ZNF696Q9H7X3 374 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 Q9N2K0 584 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 C12orf4Q9NQ89 552 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 JPT1Q9UK76 154 aa10.47□□□□□ -0.73
SSB-203ENST00000413002 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 YPEL1O60688 119 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 PEX14O75381 377 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 TSPAN15O95858 294 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 CD3GP09693 182 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 CD28P10747 220 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 RAB6AP20340 208 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 HLA-DRB3P79483 266 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 HERPUD1Q15011 391 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 TMEM30BQ3MIR4 351 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 Q3ZCU0 254 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 IDNKQ5T6J7 187 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 C16orf82Q7Z2V1 217 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 TPRA1Q86W33 373 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 TGIF2LXQ8IUE1 241 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 ODF3L1Q8IXM7 274 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 LGALS14Q8TCE9 139 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 EAF1Q96JC9 268 aaPredicted RBP10.46□□□□□ -0.73
SSB-203ENST00000413002 YPEL2Q96QA6 119 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 RIMS4Q9H426 269 aaPredicted RBP10.46□□□□□ -0.73
SSB-203ENST00000413002 SLC23A1Q9UHI7 598 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 ZNF230Q9UIE0 474 aaPredicted RBP10.46□□□□□ -0.73
SSB-203ENST00000413002 MOB4Q9Y3A3 225 aa10.46□□□□□ -0.73
SSB-203ENST00000413002 TRBV6-6A0A0A6YYG2 114 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 MFNGO00587 321 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 HIST1H1DP16402 221 aaKnown RBP10.45□□□□□ -0.74
SSB-203ENST00000413002 CEACAM6P40199 344 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 C11orf88Q6PI97 169 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 C10orf99Q6UWK7 81 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 TREML4Q6UXN2 200 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 IZUMO1Q8IYV9 350 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 OR2AK2Q8NG84 335 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 OR5H6Q8NGV6 325 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 YIPF6Q96EC8 236 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 MRPL20Q9BYC9 149 aaKnown RBP10.45□□□□□ -0.74
SSB-203ENST00000413002 WNT10AQ9GZT5 417 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 VCX3AQ9NNX9 186 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 RNF150Q9ULK6 438 aa10.45□□□□□ -0.74
SSB-203ENST00000413002 SAA2-SAA4A0A096LPE2 208 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 METTL21EPA6NDL7 271 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
SSB-203ENST00000413002 TRDCB7Z8K6 153 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 M0QZ24 198 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 HSPA12AO43301 675 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 RRP9O43818 475 aaKnown RBP10.44□□□□□ -0.74
SSB-203ENST00000413002 AIREO43918 545 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 RGS11O94810 467 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 FCGR3AP08637 254 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 SAA2P0DJI9 122 aaPredicted RBP10.44□□□□□ -0.74
SSB-203ENST00000413002 RANBP1P43487 201 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 ZNF137PP52743 207 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 MRPS15P82914 257 aaKnown RBP10.44□□□□□ -0.74
SSB-203ENST00000413002 ARFRP1Q13795 201 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 NSUN5P1Q3KNT7 163 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 CDNFQ49AH0 187 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 RPL39P5Q59GN2 51 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 STEAP3Q658P3 488 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 C5orf56Q8N8D9 126 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 FAM110DQ8TAY7 271 aaPredicted RBP10.44□□□□□ -0.74
SSB-203ENST00000413002 ABHD14BQ96IU4 210 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 IFI27L2Q9H2X8 130 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 LINC00527Q9UJ94 153 aa10.44□□□□□ -0.74
SSB-203ENST00000413002 IGKV1D-8A0A087WSZ0 117 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 BET1O15155 118 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 LANCL1O43813 399 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 FBXO24O75426 580 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 GSTT2P0CG29 244 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 GSTT2BP0CG30 244 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 CD1BP29016 333 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 F2RL1P55085 397 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 EBI3Q14213 229 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 IGSF11Q5DX21 431 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 GLDNQ6ZMI3 551 aaPredicted RBP10.43□□□□□ -0.74
SSB-203ENST00000413002 CENPVQ7Z7K6 275 aaPredicted RBP10.43□□□□□ -0.74
SSB-203ENST00000413002 Q8N6K4 173 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
SSB-203ENST00000413002 OR2T10Q8NGZ9 312 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms