RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 NCOR2Q9Y618 2525 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 CHCHD2Q9Y6H1 151 aaPredicted RBP11.12□□□□□ -0.63
PTPRN-202ENST00000409251 A0A1B0GU03 582 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 C9orf172C9J069 976 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 SIRPB1O00241 398 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 NUBP1P53384 320 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 ZNF837Q96EG3 531 aaPredicted RBP11.12□□□□□ -0.63
PTPRN-202ENST00000409251 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
PTPRN-202ENST00000409251 NAGKQ9UJ70 344 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 CACNA1BQ00975 2339 aa11.12□□□□□ -0.63
PTPRN-202ENST00000409251 MARCH11A6NNE9 402 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 NPIPA2E9PIF3 369 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 NPIPA3F8WFD2 350 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 NTF3P20783 257 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 GDF1P27539 372 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 DEGS2Q6QHC5 323 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 ZDHHC23Q8IYP9 409 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 LIPHQ8WWY8 451 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 PLPPR2Q96GM1 343 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 DNAJC4Q9NNZ3 241 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 CACNG5Q9UF02 275 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 P04436 131 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 PTGDSP41222 190 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 CARFQ8N187 725 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 OR2M3Q8NG83 312 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 LYZL4Q96KX0 146 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 STRADBQ9C0K7 418 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 A0A1B0GWJ7 208 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 DLEU1O43261 78 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 IL18BPO95998 194 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 CELA3AP09093 270 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 PMCHP20382 165 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 NPBWR2P48146 333 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 TMEM164Q5U3C3 297 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 FAM90A2PQ658T7 463 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 OR10V1Q8NGI7 309 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
PTPRN-202ENST00000409251 ZDHHC11Q9H8X9 412 aa11.11□□□□□ -0.63
PTPRN-202ENST00000409251 ANKRD11Q6UB99 2663 aaPredicted RBP11.11□□□□□ -0.63
PTPRN-202ENST00000409251 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 C1QTNF9BB2RNN3 333 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 PAGE4O60829 102 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 IFNA1P01562 189 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 B4GALT1P15291 398 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 BAXQ07812 192 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 ZNF818PQ6ZRF7 136 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 NOXO1Q8NFA2 376 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
PTPRN-202ENST00000409251 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 ULBP2Q9BZM5 246 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
PTPRN-202ENST00000409251 IL36RNQ9UBH0 155 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 LIPT2A6NK58 231 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 TUSC2O75896 110 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 DHRS3O75911 302 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 CD59P13987 128 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 LMO1P25800 156 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 THEM4Q5T1C6 240 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 ZNF774Q6NX45 483 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 MRPL30Q8TCC3 161 aaKnown RBP11.1□□□□□ -0.63
PTPRN-202ENST00000409251 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 A0A1W2PQD3 144 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 CXCL13O43927 109 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 MT-CO3P00414 261 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 PPP1R32Q7Z5V6 425 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 LYPD6Q86Y78 171 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 OR5R1Q8NH85 324 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 OR10J5Q8NHC4 309 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 SNIP1Q8TAD8 396 aaKnown RBP11.1□□□□□ -0.63
PTPRN-202ENST00000409251 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 RELNP78509 3460 aa11.1□□□□□ -0.63
PTPRN-202ENST00000409251 NUPR1O60356 82 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 PSMB3P49720 205 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 CNN1P51911 297 aaKnown RBP11.09□□□□□ -0.63
PTPRN-202ENST00000409251 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 NPIPB7O75200 414 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 PITX3O75364 302 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 GCH1P30793 250 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 HOXA6P31267 233 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
PTPRN-202ENST00000409251 SUCLG1P53597 346 aaKnown RBP11.09□□□□□ -0.63
PTPRN-202ENST00000409251 TAS2R30P59541 319 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 MMDQ15546 238 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 OSR2Q8N2R0 312 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 POLR3KQ9Y2Y1 108 aaPredicted RBP11.09□□□□□ -0.63
PTPRN-202ENST00000409251 IGKV1D-13A0A0B4J2D9 117 aa11.09□□□□□ -0.63
PTPRN-202ENST00000409251 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms