RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 JKAMPQ9P055 326 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 CDX4O14627 284 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-203ENST00000409161 TEX29Q8N6K0 151 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 WNT16Q9UBV4 365 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 PHLDA3Q9Y5J5 127 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 C7orf66A4D0T2 115 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 TYMSP04818 313 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 CCL17Q92583 94 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 FAM90A26D6RGX4 464 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 PSG9Q00887 426 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 TSPO2Q5TGU0 170 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 FAM222BQ8WU58 562 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 H3BMH7 237 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 H7C2G1 150 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 IGF2P01344 180 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 CEACAM5P06731 702 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 SLC23A3Q6PIS1 610 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 NUDT8Q8WV74 236 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 SGK494Q96LW2 274 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 NRIP2Q9BQI9 281 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 TNFRSF12AQ9NP84 129 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 FRRS1LQ9P0K9 344 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 ABCA4P78363 2273 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 HPRT1P00492 218 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 CADM4Q8NFZ8 388 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 RNF133Q8WVZ7 376 aa10.66□□□□□ -0.7
SHANK2-203ENST00000409161 ASPDHA6ND91 283 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 DEFB109BQ30KR1 87 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 FADS6Q8N9I5 356 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 BEND2Q8NDZ0 799 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 PTPMT1Q8WUK0 201 aaPredicted RBP10.65□□□□□ -0.7
SHANK2-203ENST00000409161 PHF7Q9BWX1 381 aaPredicted RBP10.65□□□□□ -0.7
SHANK2-203ENST00000409161 HEXA-AS1Q9H8Q6 139 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 TUBD1Q9UJT1 453 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 SLC35B1P78383 322 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 C10orf128Q5T292 105 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 ABHD14AQ9BUJ0 271 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 J3QR06 171 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 TCTN1Q2MV58 587 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 K7N7A8 449 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 ATP6V0CP27449 155 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 NUP37Q8NFH4 326 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 MRPL16Q9NX20 251 aaKnown RBP10.65□□□□□ -0.7
SHANK2-203ENST00000409161 HOGA1Q86XE5 327 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 RFESDQ8TAC1 157 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 UBTD1Q9HAC8 227 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 KCNK7Q9Y2U2 307 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.65□□□□□ -0.75e-8■■□□□ 12.9
SHANK2-203ENST00000409161 TGIF2-C20orf24A0A0A6YYL0 155 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 MED19A0JLT2 244 aaPredicted RBP10.65□□□□□ -0.7
SHANK2-203ENST00000409161 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.7
SHANK2-203ENST00000409161 PRSS8Q16651 343 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 HSPB7Q9UBY9 170 aa10.65□□□□□ -0.7
SHANK2-203ENST00000409161 A0A0U1RQV5 110 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 NKX2-6A6NCS4 301 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 ALKBH7Q9BT30 221 aaPredicted RBP10.65□□□□□ -0.71
SHANK2-203ENST00000409161 CISD1Q9NZ45 108 aaKnown RBP10.65□□□□□ -0.71
SHANK2-203ENST00000409161 HSF4Q9ULV5 492 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 A0A1B0GV90 55 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 PQLC2LA1A4F0 135 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 PRRT4C9JH25 899 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 FFAR1O14842 300 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 SOD3P08294 240 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 EPHA8P29322 1005 aaPredicted RBP10.65□□□□□ -0.71
SHANK2-203ENST00000409161 ATP5IP56385 69 aaPredicted RBP10.65□□□□□ -0.71
SHANK2-203ENST00000409161 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 KIR2DL4Q99706 377 aa10.65□□□□□ -0.71
SHANK2-203ENST00000409161 SPEM1Q8N4L4 309 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 PGLYRP3Q96LB9 341 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 MVDP53602 400 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 HMGCLL1Q8TB92 370 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 ASB5Q8WWX0 329 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 RARRES2Q99969 163 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 MRPL18Q9H0U6 180 aaKnown RBP10.64□□□□□ -0.71
SHANK2-203ENST00000409161 A0A1W2PQM1 296 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 BHLHA15Q7RTS1 189 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-203ENST00000409161 TRGC1P0CF51 173 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 GFERP55789 205 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 GAB4Q2WGN9 574 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 HINT1P49773 126 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-203ENST00000409161 MUC1P15941 1255 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-203ENST00000409161 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-203ENST00000409161 MS4A3Q96HJ5 214 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 LRRC61Q9BV99 259 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 DYSFO75923 2080 aa10.64□□□□□ -0.71
SHANK2-203ENST00000409161 NCOR1O75376 2440 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 C19orf67A6NJJ6 358 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 RPS4XP62701 263 aaKnown RBP10.63□□□□□ -0.71
SHANK2-203ENST00000409161 INSL4Q14641 139 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 NKG7Q16617 165 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 SPTY2D1-AS1A0A0U1RR47 76 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 RPL36A-HNRNPH2H7BZ11 118 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 ANKRD37Q7Z713 158 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 CACNA1GO43497 2377 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 C1QTNF9BB2RNN3 333 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms