RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 A0A075B6Q4 140 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 IGHV3-72A0A0B4J1Y9 119 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 RAB27BO00194 218 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 PEX14O75381 377 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 IGKV1D-33P01593 117 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 IGKV1-33P01594 117 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 CD3GP09693 182 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 TMEM11P17152 192 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 TIMM50Q3ZCQ8 353 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 ABCA11PQ4W5N1 156 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 PRR31Q5SQ13 230 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 TGIF2LXQ8IUE1 241 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 KCNK7Q9Y2U2 307 aa14.32□□□□□ -0.12
PDLIM2-206ENST00000409141 M0QZK8 103 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 GNB3P16520 340 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 VDAC2P45880 294 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 ZNF137PP52743 207 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 HERPUD1Q15011 391 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 LY6G6FQ5SQ64 297 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 OR2AK2Q8NG84 335 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 MOB4Q9Y3A3 225 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 MGAM2Q2M2H8 2515 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 TXNL1O43396 289 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 SCTP09683 121 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 SNRPBP14678 240 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 HIST1H1DP16402 221 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 HLA-DRB3P79483 266 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 YIPF6Q96EC8 236 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 SLC23A1Q9UHI7 598 aa14.31□□□□□ -0.12
PDLIM2-206ENST00000409141 SH2D7A6NKC9 451 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 TRDCB7Z8K6 153 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 M0QZ24 198 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 HSPA12AO43301 675 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 LANCL1O43813 399 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 AIREO43918 545 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 AMY1AP04745 511 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 AMY2AP04746 511 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 CD1BP29016 333 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 EBI3Q14213 229 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 C9orf152Q5JTZ5 239 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 IDNKQ5T6J7 187 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 C11orf44Q8N8P7 122 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 OR2T10Q8NGZ9 312 aa14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 EAF1Q96JC9 268 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-206ENST00000409141 TRIM64CA6NLI5 447 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 SERPINE3A8MV23 424 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 MFNGO00587 321 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 ZBTB25P24278 435 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 CEACAM6P40199 344 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 ARL6IP1Q15041 203 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 TMEM95Q3KNT9 176 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 CDNFQ49AH0 187 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 IZUMO1Q8IYV9 350 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 LGALS14Q8TCE9 139 aa14.29□□□□□ -0.12
PDLIM2-206ENST00000409141 ZNF736B4DX44 427 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 ST8SIA5O15466 376 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 MOSP00540 346 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 FCGR3AP08637 254 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 TALDO1P37837 337 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 LSM3P62310 102 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 ARFRP1Q13795 201 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 ODF3L1Q8IXM7 274 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 WNT10AQ9GZT5 417 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 OR1A1Q9P1Q5 309 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 PKD1L1Q8TDX9 2849 aa14.28□□□□□ -0.12
PDLIM2-206ENST00000409141 NCBP2LA6PVI3 153 aaKnown RBP14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 FGF16O43320 207 aa14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 TGFBR1P36897 503 aa14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 OR3A3P47888 321 aa14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 HIST2H2BDQ6DRA6 164 aa14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 TREML4Q6UXN2 200 aa14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 PARP12Q9H0J9 701 aaKnown RBP14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 IFI27L2Q9H2X8 130 aa14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 ZNF230Q9UIE0 474 aaPredicted RBP14.27□□□□□ -0.12
PDLIM2-206ENST00000409141 SAA2-SAA4A0A096LPE2 208 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 RAB29O14966 203 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 FABP7O15540 132 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 SCGNO76038 276 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 SAA2P0DJI9 122 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 KIR2DS1Q14954 304 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 ZNF833PQ6ZTB9 187 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 CENPVQ7Z7K6 275 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 C5orf56Q8N8D9 126 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 OR4A4PQ8NGN8 299 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 OR5H6Q8NGV6 325 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 EDARADDQ8WWZ3 215 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 MAFIPQ8WZ33 124 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 PHF21AQ96BD5 680 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 S1PR3Q99500 378 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 MRPL20Q9BYC9 149 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 C11orf54Q9H0W9 315 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 RHBDL2Q9NX52 303 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 PIPOXQ9P0Z9 390 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 ELF5Q9UKW6 265 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 ETV7Q9Y603 341 aa14.26□□□□□ -0.13
PDLIM2-206ENST00000409141 IGKV1-6A0A0C4DH72 117 aa14.25□□□□□ -0.13
PDLIM2-206ENST00000409141 ITGB1BP1O14713 200 aa14.25□□□□□ -0.13
PDLIM2-206ENST00000409141 FBXO24O75426 580 aa14.25□□□□□ -0.13
PDLIM2-206ENST00000409141 GSTT2P0CG29 244 aa14.25□□□□□ -0.13
PDLIM2-206ENST00000409141 GSTT2BP0CG30 244 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms