RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 LSM10Q969L4 123 aaKnown RBP8.29□□□□□ -1.08
MSH2-202ENST00000406134 PBDC1Q9BVG4 233 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 GPR87Q9BY21 358 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 PLK3Q9H4B4 646 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 OPA3Q9H6K4 179 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 A0A087WWC5 75 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 C21orf140B9A014 251 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 RAMP3O60896 148 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 TFF1P04155 84 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 SFTPCP11686 197 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 OR2B8PP59922 312 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 ABHD17BQ5VST6 288 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 ZNF573Q86YE8 665 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 CD300LFQ8TDQ1 290 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 RIMS4Q9H426 269 aaPredicted RBP8.29□□□□□ -1.08
MSH2-202ENST00000406134 RPRMQ9NS64 109 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 WSB1Q9Y6I7 421 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.29□□□□□ -1.08
MSH2-202ENST00000406134 CACNG5Q9UF02 275 aa8.29□□□□□ -1.08
MSH2-202ENST00000406134 MLNRO43193 412 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 SYNGR4O95473 234 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 SMIM6P0DI80 62 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 IGHV1-2P23083 117 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 DLK1P80370 383 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 SOHLH1Q5JUK2 328 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 FBXW9Q5XUX1 488 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 DPPA3Q6W0C5 159 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 DRAM1Q8N682 238 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 OR2J1Q9GZK6 312 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 ZDHHC11Q9H8X9 412 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 B4GALT7Q9UBV7 327 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 MIOXQ9UGB7 285 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 BTBD17A6NE02 478 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 WRBO00258 174 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 NUBP1P53384 320 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 RPL30P62888 115 aaKnown RBP8.28□□□□□ -1.08
MSH2-202ENST00000406134 RELQ04864 619 aaPredicted RBP8.28□□□□□ -1.08
MSH2-202ENST00000406134 Q8N7P7 452 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 OR10G4Q8NGN3 311 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 STRADBQ9C0K7 418 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 CACNA1GO43497 2377 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 GPR179Q6PRD1 2367 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 SIRPB1O00241 398 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 OR2C1O95371 312 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 NQO2P16083 231 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 ITGA3P26006 1051 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 MPV17P39210 176 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 ADAM5Q6NVV9 412 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 CMTM1Q8IZ96 169 aa8.28□□□□□ -1.08
MSH2-202ENST00000406134 GNPNAT1Q96EK6 184 aaPredicted RBP8.28□□□□□ -1.08
MSH2-202ENST00000406134 RIF1Q5UIP0 2472 aaKnown RBP8.28□□□□□ -1.08
MSH2-202ENST00000406134 TANC2Q9HCD6 1990 aa8.27□□□□□ -1.08
MSH2-202ENST00000406134 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 IGHV3-64DA0A0J9YX35 117 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 LRP5LA4QPB2 252 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 ANKRD30BLA7E2S9 258 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 LY86O95711 162 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 JMJD7P0C870 316 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 IAPPP10997 89 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 CLN3Q13286 438 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 LRRC75BQ2VPJ9 315 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 THNSL2Q86YJ6 484 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 NEK7Q8TDX7 302 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 MBD3L1Q8WWY6 194 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 IL1F10Q8WWZ1 152 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 SSX3Q99909 188 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 ZNF665Q9H7R5 613 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 PPP1R3CQ9UQK1 317 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 A0A1B0GV90 55 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 METTL15P1P0C7V9 234 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 CASP6P55212 293 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 VAMP2P63027 116 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 PSG7Q13046 419 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 ZNF429Q86V71 674 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.09
MSH2-202ENST00000406134 PFDN5Q99471 154 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 PARD6GQ9BYG4 376 aaPredicted RBP8.27□□□□□ -1.09
MSH2-202ENST00000406134 TOLLIPQ9H0E2 274 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 MMP24Q9Y5R2 645 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 WNT9BO14905 357 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 SYNGR2O43760 224 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 MDKP21741 143 aaPredicted RBP8.27□□□□□ -1.09
MSH2-202ENST00000406134 LINC00205P59089 165 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 PMP22Q01453 160 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 NCMAPQ5T1S8 102 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 TMEM14EPQ6UXP3 125 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 P4HA3Q7Z4N8 544 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 COQ2Q96H96 371 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 RAB40CQ96S21 281 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 DEFB127Q9H1M4 99 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 CLCF1Q9UBD9 225 aa8.27□□□□□ -1.09
MSH2-202ENST00000406134 IQCF6A8MYZ5 107 aa8.26□□□□□ -1.09
MSH2-202ENST00000406134 CDIPTO14735 213 aa8.26□□□□□ -1.09
MSH2-202ENST00000406134 APLNRP35414 380 aa8.26□□□□□ -1.09
MSH2-202ENST00000406134 KHDC3LQ587J8 217 aa8.26□□□□□ -1.09
MSH2-202ENST00000406134 OR4C12Q96R67 309 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms