RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 RNF138Q8WVD3 245 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 PCDH15Q96QU1 1955 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 LOC102725191A0A1B0GVB3 256 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 CDS2O95674 445 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 CCNOP22674 350 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 HERV-K104P63124 156 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 WDR25Q64LD2 544 aaPredicted RBP13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 SPSB1Q96BD6 273 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 HINT2Q9BX68 163 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 PLEKHF2Q9H8W4 249 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 LAMP3Q9UQV4 416 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 GON4LQ3T8J9 2241 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 AZU1P20160 251 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 CD1BP29016 333 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 CLDN17P56750 224 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 DTX1Q86Y01 620 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 NFAM1Q8NET5 270 aaPredicted RBP13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 METTL7AQ9H8H3 244 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 LIPGQ9Y5X9 500 aa13.89□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGLV3-32A0A0A0MS00 114 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ANGPTL7O43827 346 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR1D5P58170 312 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 SRPXP78539 464 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF703Q9H7S9 590 aaPredicted RBP13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF286AQ9HBT8 521 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 P4HTMQ9NXG6 502 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 WSB1Q9Y6I7 421 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ATG2AQ2TAZ0 1938 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 M0R135 149 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 TNFSF15O95150 251 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 BRI3O95415 125 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 DBHP09172 617 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 STAG3L2P0CL84 134 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 HERV-K104P61576 105 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 PMP22Q01453 160 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF506Q5JVG8 444 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 PLXDC1Q8IUK5 500 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM256Q8N2U0 113 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR2Z1Q8NG97 314 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 GNPNAT1Q96EK6 184 aaPredicted RBP13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF799Q96GE5 643 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 NKX2-4Q9H2Z4 354 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 C11orf1Q9H5F2 150 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF586Q9NXT0 402 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 CFAP54Q96N23 3096 aa13.88□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGSF23A1L1A6 192 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 SPRY1O43609 319 aaPredicted RBP13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 TOX4O94842 621 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 MMP9P14780 707 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 RAB11AP62491 216 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 RAB31Q13636 194 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 ICAM4Q14773 271 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 RSPO1Q2MKA7 263 aaPredicted RBP13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 LHFPL2Q6ZUX7 228 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 ANKRD37Q7Z713 158 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 IL22RA1Q8N6P7 574 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 RBMXL1Q96E39 390 aaKnown RBP13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 RAB29O14966 203 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 HYPMO75409 117 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 EXT1Q16394 746 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 Q6ZWC4 215 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 SPTSSAQ969W0 71 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR2V2Q96R30 315 aa13.87□□□□□ -0.19
COL4A3BP-204ENST00000405807 C3orf85A0A1B0GTC6 90 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 NKX2-6A6NCS4 301 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 ZNF732B4DXR9 585 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 OMGP23515 440 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 FKBP2P26885 142 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 CDKN1AP38936 164 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR4B1Q8NGF8 309 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 SPIN2AQ99865 258 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 SPIN2BQ9BPZ2 258 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 B9A039 149 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 MPPED1O15442 326 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 NUPR1O60356 82 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 HBE1P02100 147 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 CD38P28907 300 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 PTGDSP41222 190 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 C10orf128Q5T292 105 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM252Q8N6L7 170 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 TMEM38BQ9NVV0 291 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGHV1OR21-1A0A087WYE8 117 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 LMO7DNF2Z398 122 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 CD55P08174 381 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 ACOT6Q3I5F7 207 aaPredicted RBP13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 SP5Q6BEB4 398 aaPredicted RBP13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 CPEB2Q7Z5Q1 589 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 C20orf196Q8IYI0 205 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 UBALD2Q8IYN6 164 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 OR2M3Q8NG83 312 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 FGF21Q9NSA1 209 aa13.86□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGLC2P0DOY2 106 aa13.85□□□□□ -0.19
COL4A3BP-204ENST00000405807 IGLC3P0DOY3 106 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms