RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 AKR1E2Q96JD6 320 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 DCTN5Q9BTE1 182 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 SUCNR1Q9BXA5 334 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 OR2S2Q9NQN1 319 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 CALYQ9NYX4 217 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 UBE2J1Q9Y385 318 aaPredicted RBP17.4■□□□□ 0.38
TPM1-208ENST00000404484 ZNF729A6NN14 1252 aaPredicted RBP17.39■□□□□ 0.37
TPM1-208ENST00000404484 LYNX1G3V0Z9 82 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 F2RL2O00254 374 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 OR2A4O95047 310 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 LYNX1P0DP58 116 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 KCTD9Q7L273 389 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 OR5M8Q8NGP6 311 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 EDARADDQ8WWZ3 215 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 OR2A7Q96R45 310 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 CHODLQ9H9P2 273 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 LINC00312Q9Y6C7 94 aa17.39■□□□□ 0.37
TPM1-208ENST00000404484 ACANP16112 2415 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 KBTBD11-OT1A0A1B0GTJ5 212 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 MPPED1O15442 326 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 RGS11O94810 467 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 MSMO1Q15800 293 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 ZNF818PQ6ZRF7 136 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 NLRC3Q7RTR2 1065 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 BVESQ8NE79 360 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 OR52L2PQ8NGH6 319 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 RANBP3Q9H6Z4 567 aaPredicted RBP17.38■□□□□ 0.37
TPM1-208ENST00000404484 RAB18Q9NP72 206 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 CCL28Q9NRJ3 127 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 TAS2R3Q9NYW6 316 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 CLN8Q9UBY8 286 aa17.38■□□□□ 0.37
TPM1-208ENST00000404484 DBX1A6NMT0 343 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 HSD17B6O14756 317 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 B3GALNT1O75752 331 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 CGB3P0DN86 165 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 CGB7P0DN87 165 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 TMEM33P57088 247 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 RPL31P62899 125 aaKnown RBP17.37■□□□□ 0.37
TPM1-208ENST00000404484 SRPXP78539 464 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 NOXA1Q86UR1 476 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 LDLRAD3Q86YD5 345 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 ZBTB34Q8NCN2 500 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 RFESDQ8TAC1 157 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 CHIAQ9BZP6 476 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 GAL3ST2Q9H3Q3 398 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 LINC00574Q9H8X3 128 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 GNG12Q9UBI6 72 aa17.37■□□□□ 0.37
TPM1-208ENST00000404484 PIGBOS1A0A0B4J2F0 54 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 DVL1O14640 695 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 GPR37O15354 613 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 F12P00748 615 aaPredicted RBP17.36■□□□□ 0.37
TPM1-208ENST00000404484 EFNA4P52798 201 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 TMEM155Q4W5P6 130 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 LYPD2Q6UXB3 125 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 KCNS2Q9ULS6 477 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 TRBV23-1A0A0A0MS06 115 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 PPIHO43447 177 aaKnown RBP17.36■□□□□ 0.37
TPM1-208ENST00000404484 YPEL1O60688 119 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 OR8U9P0C7N5 309 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 PPP1CCP36873 323 aaKnown RBP17.36■□□□□ 0.37
TPM1-208ENST00000404484 C2orf68Q2NKX9 166 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 ANKRD55Q3KP44 614 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 TBC1D26Q86UD7 250 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 OR10A7Q8NGE5 316 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 OR2T35Q8NGX2 323 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 OR8U1Q8NH10 309 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 YPEL2Q96QA6 119 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 CTSZQ9UBR2 303 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 MIOXQ9UGB7 285 aa17.36■□□□□ 0.37
TPM1-208ENST00000404484 MED13LQ71F56 2210 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 C3orf85A0A1B0GTC6 90 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 WNT2P09544 360 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 OR5AC1P0C628 307 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 CDKN1AP38936 164 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 GZMKP49863 264 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 H2BFSP57053 126 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 GNMTQ14749 295 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 C17orf58Q2M2W7 97 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 KRTAP1-3Q8IUG1 177 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 ZNF645Q8N7E2 425 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 OR52M1Q8NGK5 317 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 H1FXQ92522 213 aaKnown RBP17.35■□□□□ 0.37
TPM1-208ENST00000404484 HYLS1Q96M11 299 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 PDCD10Q9BUL8 212 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 PIPOXQ9P0Z9 390 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 DSCAML1Q8TD84 2053 aa17.35■□□□□ 0.37
TPM1-208ENST00000404484 RNF212BA8MTL3 300 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 OVOL3O00110 214 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 ITGB1BP1O14713 200 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 PHF1O43189 567 aaPredicted RBP17.34■□□□□ 0.37
TPM1-208ENST00000404484 SRSF4Q08170 494 aaKnown RBP17.34■□□□□ 0.37
TPM1-208ENST00000404484 TMEM187Q14656 261 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 LY6G6FQ5SQ64 297 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 GSG1LQ6UXU4 331 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 TCF23Q7RTU1 214 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 LGI3Q8N145 548 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 LRRC75A-AS1Q8N1F1 130 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 LRTM2Q8N967 370 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 PERPQ96FX8 193 aa17.34■□□□□ 0.37
TPM1-208ENST00000404484 IDI2-AS1Q9NZ38 188 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms