RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 TMEM50BP56557 158 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 CLDN12P56749 244 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 RAB11BQ15907 218 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 ZNF367Q7RTV3 350 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 SLC35E3Q7Z769 313 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 SVOPQ8N4V2 548 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 GALMQ96C23 342 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 S1PR3Q99500 378 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 ABCG5Q9H222 651 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 LIN7CQ9NUP9 197 aaKnown RBP12.51□□□□□ -0.41
ATG4B-203ENST00000400772 AK3Q9UIJ7 227 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 LRRC42Q9Y546 428 aa12.51□□□□□ -0.41
ATG4B-203ENST00000400772 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 SERPINE3A8MV23 424 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-203ENST00000400772 GPR12P47775 334 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 LSAMPQ13449 338 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 C2orf76Q3KRA6 126 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 STPG2Q8N412 459 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 CHPT1Q8WUD6 406 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 FAM3DQ96BQ1 224 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 RITA1Q96K30 269 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 HDHD3Q9BSH5 251 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-203ENST00000400772 URM1Q9BTM9 101 aaKnown RBP12.5□□□□□ -0.41
ATG4B-203ENST00000400772 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 V9GY05 133 aa12.5□□□□□ -0.41
ATG4B-203ENST00000400772 PF4V1P10720 104 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 OR3A3P47888 321 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 ZNF833PQ6ZTB9 187 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 C18orf65Q6ZTR6 163 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 FAM71E2Q8N5Q1 922 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 NABP2Q9BQ15 211 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
ATG4B-203ENST00000400772 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 CHMP1AQ9HD42 196 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-203ENST00000400772 HSF4Q9ULV5 492 aa12.49□□□□□ -0.41
ATG4B-203ENST00000400772 TMEM272A0A1B0GTI8 110 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 RGS11O94810 467 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 IGLL1P15814 213 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 VEGFCP49767 419 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 OR10A3P58181 314 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 RPL23AP62750 156 aaKnown RBP12.48□□□□□ -0.41
ATG4B-203ENST00000400772 KHDC1LQ5JSQ8 128 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 PLAC9Q5JTB6 97 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 HES5Q5TA89 166 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 SETD6Q8TBK2 473 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 IL1F10Q8WWZ1 152 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 PECRQ9BY49 303 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
ATG4B-203ENST00000400772 RIMS4Q9H426 269 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-203ENST00000400772 NDUFB11Q9NX14 153 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 ABRACLQ9P1F3 81 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 STEAP1Q9UHE8 339 aa12.48□□□□□ -0.41
ATG4B-203ENST00000400772 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 TRDV1A0A1B0GX56 115 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 DENRO43583 198 aaKnown RBP12.47□□□□□ -0.41
ATG4B-203ENST00000400772 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-203ENST00000400772 CD33P20138 364 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 PSMD7P51665 324 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 GABARAPL2P60520 117 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 OR2AK2Q8NG84 335 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 Q9N2K0 584 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 KCNK7Q9Y2U2 307 aa12.47□□□□□ -0.41
ATG4B-203ENST00000400772 AP4M1O00189 453 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 MRPS14O60783 128 aaKnown RBP12.46□□□□□ -0.41
ATG4B-203ENST00000400772 PF4P02776 101 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 SCTP09683 121 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 CNTFRP26992 372 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 SLC35B1P78383 322 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 UBE2UQ5VVX9 321 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 SPARTQ8N0X7 666 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 COMMD1Q8N668 190 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 AGMATQ9BSE5 352 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 OR1A1Q9P1Q5 309 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 SLC23A1Q9UHI7 598 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 RAB22AQ9UL26 194 aa12.46□□□□□ -0.41
ATG4B-203ENST00000400772 IGKV1-6A0A0C4DH72 117 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 ITGB1BP1O14713 200 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 PDCD5O14737 125 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 SOX6P35712 828 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 CEACAM6P40199 344 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 ACTBP60709 375 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 HLA-DRB3P79483 266 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 CFHR3Q02985 330 aa12.45□□□□□ -0.42
ATG4B-203ENST00000400772 PNLIPRP3Q17RR3 467 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms