RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RPA2P15927 270 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 NFYBP25208 207 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 C9orf152Q5JTZ5 239 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 ARL11Q969Q4 196 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 CCL19Q99731 98 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 CHIAQ9BZP6 476 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 FAM234AQ9H0X4 552 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 MYO9AB2RTY4 2548 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 CEACAM18A8MTB9 384 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 CCSO14618 274 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 HSD17B6O14756 317 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 RP2O75695 350 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 IFNA4P05014 189 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 SMIM6P0DI80 62 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 CXCL2P19875 107 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 PVALBP20472 110 aaPredicted RBP9.69□□□□□ -0.86
SKA3-203ENST00000400018 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
SKA3-203ENST00000400018 IL13RA2Q14627 380 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 TESK1Q15569 626 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 SLC9A3R2Q15599 337 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 OR2B11Q5JQS5 317 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 ATPAF1Q5TC12 328 aaPredicted RBP9.69□□□□□ -0.86
SKA3-203ENST00000400018 HSD17B13Q7Z5P4 300 aaPredicted RBP9.69□□□□□ -0.86
SKA3-203ENST00000400018 CBLN2Q8IUK8 224 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 Q8IYB0 196 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 BPESC1Q9GZL8 116 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 SCP2D1Q9UJQ7 156 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 HSPA12AO43301 675 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 GPX4P36969 197 aaPredicted RBP9.68□□□□□ -0.86
SKA3-203ENST00000400018 GNG10P50151 68 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
SKA3-203ENST00000400018 DYRK1AQ13627 763 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 PNLIPRP3Q17RR3 467 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 SPIN3Q5JUX0 258 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 BTNL3Q6UXE8 466 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 OR1S1Q8NH92 325 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 MXRA5Q9NR99 2828 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 LRRC30A6NM36 301 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 K7N7A8 449 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 SLC31A2O15432 143 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 SSNA1O43805 119 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 HBZP02008 142 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 CD74P04233 296 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 CD55P08174 381 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 VAMP1P23763 118 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 S100PP25815 95 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 MRPS10P82664 201 aaKnown RBP9.68□□□□□ -0.86
SKA3-203ENST00000400018 PRAMEF5Q5TYX0 476 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 ZNF788Q6ZQV5 615 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 ABHD14BQ96IU4 210 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 RAB1BQ9H0U4 201 aa9.68□□□□□ -0.86
SKA3-203ENST00000400018 SLC25A10Q9UBX3 287 aaPredicted RBP9.68□□□□□ -0.86
SKA3-203ENST00000400018 L7N2F9 121 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 TMEM127O75204 238 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 OR8U9P0C7N5 309 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 CYB5R2Q6BCY4 276 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 DTX2Q86UW9 622 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 FAM185AQ8N0U4 392 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 OR8U1Q8NH10 309 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 GLYATL2Q8WU03 294 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 C5orf66Q9H5L9 145 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 ZNF286AQ9HBT8 521 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 TANC2Q9HCD6 1990 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 ODAMA1E959 279 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 WRBO00258 174 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 GPR31O00270 319 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 SULT1C2O00338 296 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 NDUFB6O95139 128 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 CEACAM6P40199 344 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 C4orf46Q504U0 113 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 C1orf229Q6ZS94 237 aaPredicted RBP9.67□□□□□ -0.86
SKA3-203ENST00000400018 ARL6IP6Q8N6S5 226 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 PDCD10Q9BUL8 212 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 CCL28Q9NRJ3 127 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 ZNF69Q9UC07 566 aa9.67□□□□□ -0.86
SKA3-203ENST00000400018 GPR37O15354 613 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 CRYBA1P05813 215 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 SULT1A3P0DMM9 295 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 SULT1A4P0DMN0 295 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 LMO1P25800 156 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 ZNF134P52741 427 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 AP3S2P59780 193 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 ZNF660Q6AZW8 331 aaPredicted RBP9.66□□□□□ -0.86
SKA3-203ENST00000400018 Q8TCH9 128 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 ZNF665Q9H7R5 613 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.66□□□□□ -0.86
SKA3-203ENST00000400018 TAS2R8Q9NYW2 309 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 TRDCB7Z8K6 153 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 SCGNO76038 276 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 ADH4P08319 380 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 CFHR2P36980 270 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 ATP5J2P56134 94 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 IL13RA1P78552 427 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 MZT1Q08AG7 82 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 TMEM230Q96A57 120 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 PFDN5Q99471 154 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
SKA3-203ENST00000400018 FXYD6Q9H0Q3 95 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms