RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MAP1LC3B2A6NCE7 125 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 TNFSF12O43508 249 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 SCTP09683 121 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 WNT5AP41221 380 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 BAXQ07812 192 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF154Q13106 437 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 ODF3L1Q8IXM7 274 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 SPIN2AQ99865 258 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 SPIN2BQ9BPZ2 258 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 MAP1LC3BQ9GZQ8 125 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 AURKAIP1Q9NWT8 199 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 IGKV1D-13A0A0B4J2D9 117 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 TYMSP04818 313 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 IGKV1-13P0DP09 117 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 COX6A1P12074 109 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 CHRNB4P30926 498 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 EXT1Q16394 746 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 BSXQ3C1V8 233 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 CYP2G1PQ6ZSU1 146 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 IFI44Q8TCB0 444 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 WFIKKN1Q96NZ8 548 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 FOXB1Q99853 325 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF665Q9H7R5 613 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 FOXJ2Q9P0K8 574 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 TMEM56-RWDD3S4R434 201 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF816-ZNF321PA0A0X1KG74 233 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 CXCL13O43927 109 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 IGHV3-9P01782 118 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 BCL3P20749 454 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 TMEM183BQ1AE95 376 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 RIPPLY2Q5TAB7 128 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 TEX43Q6ZNM6 134 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF845Q96IR2 970 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 IMMP1LQ96LU5 166 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 TFPI2P48307 235 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 CARD18P57730 90 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 RAC3P60763 192 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 OR2T10Q8NGZ9 312 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 CPT1CQ8TCG5 803 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 ABHD14BQ96IU4 210 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 ATP5SQ99766 215 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 SMIM7Q9BQ49 75 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 SF3B5Q9BWJ5 86 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
CHMP1A-201ENST00000397901 LOC102723996A0A087X1L8 192 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 NKX6-3A6NJ46 265 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 H3BP45 60 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 K7EP13 123 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 CHST1O43916 411 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 CBR3O75828 277 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 CFIP05156 583 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 KLF3P57682 345 aaPredicted RBP13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 KRTAP27-1Q3LI81 207 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 RPS19BP1Q86WX3 136 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 SLC35E1Q96K37 410 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 SIGLEC12Q96PQ1 595 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 CCL28Q9NRJ3 127 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 FREM2Q5SZK8 3169 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 GJE1A6NN92 205 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF716A6NP11 495 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 IFNA1P01562 189 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 CCNOP22674 350 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 MRGPRGQ86SM5 289 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 MBD3L1Q8WWY6 194 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 OR51I2Q9H344 312 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 RBKSQ9H477 322 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 NCOR1P1Q9H4R4 102 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
CHMP1A-201ENST00000397901 SLC22A20A6NK97 555 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 SPINK2P20155 84 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 HNF1AP20823 631 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 PTTG1IPP53801 180 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 B3GALT5-AS1P59052 145 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 RPS18P62269 152 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 NMSQ5H8A3 153 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 ETFRF1Q6IPR1 90 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 SLC23A3Q6PIS1 610 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 OR2V1Q8NHB1 315 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 ANAPC16Q96DE5 110 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 GSX1Q9H4S2 264 aaPredicted RBP13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 TMEM106BQ9NUM4 274 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 CRIM1Q9NZV1 1036 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 PATE3B3GLJ2 98 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 YPEL1O60688 119 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 CYC1P08574 325 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 SRP14P37108 136 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 GGNQ86UU5 652 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 YPEL2Q96QA6 119 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 ZPBPQ9BS86 351 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 WDR54Q9H977 334 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms