RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 USP9XQ93008 2570 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 FLNCQ14315 2725 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 A1L4Q6 167 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 CLEC18AA5D8T8 446 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 E5RGE8 158 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 SLC33A1O00400 549 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 FLI1Q01543 452 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 TMEM187Q14656 261 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 ABCA11PQ4W5N1 156 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 Q6ZS49 121 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 PUSL1Q8N0Z8 303 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 UBAC2Q8NBM4 344 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 CLEC18CQ8NCF0 446 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 OR4A4PQ8NGN8 299 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 CCL17Q92583 94 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 UQCC1Q9NVA1 299 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 NSG2Q9Y328 171 aa16.16■□□□□ 0.18
PDLIM2-204ENST00000397760 IGHV3OR15-7A0A075B7D8 119 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM74A7A6NL05 159 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 F8W036 122 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 H7C1Q1 480 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 NUPL2O15504 423 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 TSPAN9O75954 239 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 PSG2P11465 335 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 CHD3Q12873 2000 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM74A3Q4VXF1 159 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 GPR157Q5UAW9 335 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 CCDC71LQ8N9Z2 235 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 MOB3AQ96BX8 217 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 RAB1BQ9H0U4 201 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 IFNL4K9M1U5 179 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 ZNF205O95201 554 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 TFF1P04155 84 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 ADCYAP1P18509 176 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 LMO1P25800 156 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 PRDX2P32119 198 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 SP5Q6BEB4 398 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 RPL7L1Q6DKI1 246 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 DHRS7BQ6IAN0 325 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 FAM185AQ8N0U4 392 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 C1orf87Q8N0U7 546 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 RTN4IP1Q8WWV3 396 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 ARV1Q9H2C2 271 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 OR2S2Q9NQN1 319 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 TMEM106BQ9NUM4 274 aa16.15■□□□□ 0.18
PDLIM2-204ENST00000397760 IGKV1D-17A0A075B6S4 117 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 IGHV1-69-2A0A0G2JMI3 117 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 FCGR2CP31995 323 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 GLP1RP43220 463 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 F2RL1P55085 397 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 LIAT1Q6ZQX7 453 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 LGI3Q8N145 548 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 CD177Q8N6Q3 437 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 LYPD6BQ8NI32 183 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 C18orf12Q96KH6 178 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 LIME1Q9H400 295 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 CACNA1DQ01668 2161 aa16.14■□□□□ 0.17
PDLIM2-204ENST00000397760 TMEM178BH3BS89 294 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 GABRA2P47869 451 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 SRPXP78539 464 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 COL10A1Q03692 680 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 TLE4Q04727 773 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 BTNL8Q6UX41 500 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 COMMD1Q8N668 190 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 RSRP1Q9BUV0 290 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 SEBOXQ9HB31 216 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 TREM1Q9NP99 234 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 METRNQ9UJH8 293 aa16.13■□□□□ 0.17
PDLIM2-204ENST00000397760 GPR31O00270 319 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 PSPNO60542 156 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 COX6B1P14854 86 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 DEFB108BQ8NET1 73 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 SLC2A9Q9NRM0 540 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 FBXL17Q9UF56 701 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 TMED3Q9Y3Q3 217 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 ARFGEF3Q5TH69 2177 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 COL12A1Q99715 3063 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 OOEPA6NGQ2 149 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 MED6O75586 246 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 HEXAP06865 529 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 MUC1P15941 1255 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 TMEM33P57088 247 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 GUCA2BQ16661 112 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 HFEQ30201 348 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 TEX36Q5VZQ5 186 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 LDLRAD3Q86YD5 345 aa16.12■□□□□ 0.17
PDLIM2-204ENST00000397760 BORCS7-ASMTA0A0B4J1R7 106 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 H7C2Y5 167 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 GPR137BO60478 399 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 NAPSAO96009 420 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 CD5P06127 495 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 OR5AC1P0C628 307 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 SEC11BP0C7V7 166 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 MDH2P40926 338 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 P2RY1P47900 373 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 SHEQ5VZ18 495 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 PLPPR1Q8TBJ4 325 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 TOMM40LQ969M1 308 aa16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 MSI2Q96DH6 328 aaKnown RBP16.11■□□□□ 0.17
PDLIM2-204ENST00000397760 HRH4Q9H3N8 390 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms