RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FOXD3Q9UJU5 478 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 CBR3O75828 277 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 LTBRP36941 435 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 MAJINQ3KP22 176 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 GFI1BQ5VTD9 330 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 ERASQ7Z444 233 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 ST6GALNAC3Q8NDV1 305 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TXNDC17Q9BRA2 123 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 PNRC2Q9NPJ4 139 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF891A8MT65 544 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TRDCB7Z8K6 153 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 NPIPB11E5RHQ5 1161 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 MRPL33O75394 65 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 CAMPP49913 170 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 NUTF2P61970 127 aaKnown RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 ACSM6Q6P461 480 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 SLC35E3Q7Z769 313 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 OR2M3Q8NG83 312 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 PSMG3Q9BT73 122 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM56-RWDD3S4R434 201 aa4.72□□□□□ -1.65
PTPRD-205ENST00000397611 EP300Q09472 2414 aaPredicted RBP4.71□□□□□ -1.65
PTPRD-205ENST00000397611 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM11P17152 192 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 ADCYAP1P18509 176 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 EDDM3AQ14507 147 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 P2RY6Q15077 328 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 MRGPRGQ86SM5 289 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 ATOH7Q8N100 152 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 MANBALQ9NQG1 85 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 B4GALT7Q9UBV7 327 aa4.71□□□□□ -1.65
PTPRD-205ENST00000397611 A0A087WV48 116 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 IGHV3-15A0A0B4J1V0 119 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 A0A1W2PPE3 182 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 FAM90A26D6RGX4 464 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 FGF5P12034 268 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 SRD5A2P31213 254 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 FUT6P51993 359 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 GABRA6Q16445 453 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 OR2I1PQ8NGU4 316 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 PHF7Q9BWX1 381 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 P4HTMQ9NXG6 502 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 UQCR10Q9UDW1 63 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 TINAGQ9UJW2 476 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 YTHDF2Q9Y5A9 579 aaKnown RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 CIDEAO60543 219 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 COMPP49747 757 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 PLGLAQ15195 96 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM251Q8N6I4 163 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 ACY3Q96HD9 319 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 RASL10BQ96S79 203 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF665Q9H7R5 613 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 GP6Q9HCN6 339 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 K7N7A8 449 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 CSN3P07498 182 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 OR5AL1P0C617 328 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 TAS2R45P59539 299 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 ERVFRD-1P60508 538 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 DHRS13Q6UX07 377 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 LINC00596Q86U02 117 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 OR1K1Q8NGR3 316 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 OR11L1Q8NGX0 322 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 MISP3Q96FF7 219 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 WDR61Q9GZS3 305 aaKnown RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 PRDM14Q9GZV8 571 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM191AQ9H0A3 160 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 SMOC1Q9H4F8 434 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 NPBWR2P48146 333 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 SERF2P84101 59 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 FA2HQ7L5A8 372 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 ANKRD37Q7Z713 158 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 GAPTQ8N292 157 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF524Q96C55 264 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 IMMP1LQ96LU5 166 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 OR2J1Q9GZK6 312 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 DUSP15Q9H1R2 295 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 PLA2G3Q9NZ20 509 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 SCN2AQ99250 2005 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 KIAA1549LQ6ZVL6 1849 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 EFNA2O43921 213 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 LMX1BO60663 402 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 NAPSAO96009 420 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 GCH1P30793 250 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 MDH2P40926 338 aaKnown RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 RNPS1Q15287 305 aaKnown RBP4.71□□□□□ -1.66
PTPRD-205ENST00000397611 UBALD2Q8IYN6 164 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 SCRT1Q9BWW7 348 aa4.71□□□□□ -1.66
PTPRD-205ENST00000397611 CER1O95813 267 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIKESHIQ53FT3 197 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SP5Q6BEB4 398 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF573Q86YE8 665 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 KCNE4Q8WWG9 221 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 DPF1Q92782 380 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM250H0YL14 139 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 RHBDL1O75783 438 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CELA2BP08218 269 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SRP14P37108 136 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms