RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ODF3L1Q8IXM7 274 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 C10orf67Q8IYJ2 551 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 GAPTQ8N292 157 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 STX19Q8N4C7 294 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 OR10V1Q8NGI7 309 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 OR51A2Q8NGJ7 313 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 NEK7Q8TDX7 302 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 C4orf36Q96KX1 117 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 THTPAQ9BU02 230 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 JAM3Q9BX67 310 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 MRPL20Q9BYC9 149 aaKnown RBP7.15□□□□□ -1.26
NEDD9-203ENST00000397378 FAM192AQ9GZU8 254 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 GABARAPL1Q9H0R8 117 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 METTL9Q9H1A3 318 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 VCX3BQ9H321 246 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 RIBC2Q9H4K1 309 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 RANGRFQ9HD47 186 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-203ENST00000397378 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 CNOT2Q9NZN8 540 aaKnown RBP7.15□□□□□ -1.26
NEDD9-203ENST00000397378 DHDHQ9UQ10 334 aa7.15□□□□□ -1.26
NEDD9-203ENST00000397378 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 G3V2T6 193 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 J3QLW9 94 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 RRHO14718 337 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 CDRT1O95170 752 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 TFAP2AP05549 437 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF19P17023 458 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 CD40LGP29965 261 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 TPPP2P59282 170 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 FLOT2Q14254 428 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 MOGAT2Q3SYC2 334 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 ACTBL2Q562R1 376 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 LY6G6FQ5SQ64 297 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 LCN12Q6JVE5 192 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF833PQ6ZTB9 187 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 Q8N402 240 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 ACBD7Q8N6N7 88 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 OR9G4Q8NGQ1 327 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 OR1L1Q8NH94 360 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 MRPL48Q96GC5 212 aaKnown RBP7.14□□□□□ -1.27
NEDD9-203ENST00000397378 CIB1Q99828 191 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 ABHD14AQ9BUJ0 271 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 PLEKHA3Q9HB20 300 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 SPACA1Q9HBV2 294 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 OR2S2Q9NQN1 319 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 PAK1IP1Q9NWT1 392 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-203ENST00000397378 RCC2Q9P258 522 aaKnown RBP7.14□□□□□ -1.27
NEDD9-203ENST00000397378 TRAPPC2LQ9UL33 140 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 GMPPBQ9Y5P6 360 aa7.14□□□□□ -1.27
NEDD9-203ENST00000397378 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF780AO75290 641 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-203ENST00000397378 CA11O75493 328 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 CNIH1O95406 144 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 SERPINA2P20848 420 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 POLR2IP36954 125 aaKnown RBP7.13□□□□□ -1.27
NEDD9-203ENST00000397378 ADARB1P78563 741 aaKnown RBP7.13□□□□□ -1.27
NEDD9-203ENST00000397378 FAM71F2Q6NXP2 309 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF554Q86TJ5 538 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 PPP1R27Q86WC6 154 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 ZDHHC13Q8IUH4 622 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 SYS1Q8N2H4 156 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 PRR18Q8N4B5 295 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 OR4K15Q8NH41 348 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 OR5AK2Q8NH90 309 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 TSEN15Q8WW01 171 aaKnown RBP7.13□□□□□ -1.27
NEDD9-203ENST00000397378 TRUB1Q8WWH5 349 aaKnown RBP7.13□□□□□ -1.27
NEDD9-203ENST00000397378 MS4A10Q96PG2 267 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 PDCD1LG2Q9BQ51 273 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 GABARAPL3Q9BY60 117 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 FBXL15Q9H469 300 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 JPT1Q9UK76 154 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 ING4Q9UNL4 249 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 RRP15Q9Y3B9 282 aaKnown RBP7.13□□□□□ -1.27
NEDD9-203ENST00000397378 A3GALT2U3KPV4 340 aa7.13□□□□□ -1.27
NEDD9-203ENST00000397378 MCRIP1C9JLW8 97 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 H3BUA1 57 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 BOLA2-SMG1P6H3BVE0 249 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 FCN1O00602 326 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 YPEL1O60688 119 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 SC5DO75845 299 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 FADS2O95864 444 aaKnown RBP7.12□□□□□ -1.27
NEDD9-203ENST00000397378 TRGV3P03979 118 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 GTF2F2P13984 249 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 RCC1P18754 421 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF93P35789 620 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-203ENST00000397378 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
NEDD9-203ENST00000397378 HTD2P86397 168 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 PRR20EP86478 221 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 PRR20CP86479 221 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 PRR20DP86480 221 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 PRR20BP86481 221 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 PRR20AP86496 221 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 MRPL28Q13084 256 aaKnown RBP7.12□□□□□ -1.27
NEDD9-203ENST00000397378 GNMTQ14749 295 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 ATP6AP1Q15904 470 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 SLC25A30Q5SVS4 291 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 ZNF562Q6V9R5 426 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 LAX1Q8IWV1 398 aa7.12□□□□□ -1.27
NEDD9-203ENST00000397378 LFNGQ8NES3 379 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms