RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 FGF9P31371 208 aaPredicted RBP10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 GNG10P50151 68 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 ETV1P50549 477 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 MECP2P51608 486 aaKnown RBP10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 FUT6P51993 359 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 ELMOD2Q8IZ81 293 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 MS4A15Q8N5U1 240 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 OR10X1Q8NGY0 326 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 OPALINQ96PE5 141 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 RSRP1Q9BUV0 290 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 ALG8Q9BVK2 526 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 ZCCHC4Q9H5U6 513 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 PLEKHA3Q9HB20 300 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 EXOSC4Q9NPD3 245 aaKnown RBP10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 GSTK1Q9Y2Q3 226 aa10.34□□□□□ -0.75
VCPKMT-201ENST00000395859 ZNF670-ZNF695F2Z2N8 137 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 LOC110117498-PIK3R3F6TDL0 507 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SLC33A1O00400 549 aaPredicted RBP10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SH2D1BO14796 132 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SERPINA3P01011 423 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 HLA-DRB1P01911 266 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SNU13P55769 128 aaKnown RBP10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 CD200R1LQ6Q8B3 271 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 BCDIN3DQ7Z5W3 292 aaKnown RBP10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SLC35F2Q8IXU6 374 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 YIPF7Q8N8F6 280 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 OR10A7Q8NGE5 316 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 OR51T1Q8NGJ9 327 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SIGLEC8Q9NYZ4 499 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 SSR3Q9UNL2 185 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 COPS3Q9UNS2 423 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 KLK5Q9Y337 293 aaPredicted RBP10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 R4GMQ9 66 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 UBR4Q5T4S7 5183 aa10.33□□□□□ -0.76
VCPKMT-201ENST00000395859 IGKV1-12A0A0C4DH73 117 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 TRDV1A0A1B0GX56 115 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 IGKV1D-12P01611 117 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 HSMCR30P0CW71 290 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 SLC2A2P11168 524 aaPredicted RBP10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 NDPQ00604 133 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 TNFRSF9Q07011 255 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 KLF5Q13887 457 aaPredicted RBP10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 BCL2L15Q5TBC7 163 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 CROCCP3Q8IVE0 287 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 OR10H4Q8NGA5 316 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 CASTOR1Q8WTX7 329 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 RHOVQ96L33 236 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 SPACA5Q96QH8 159 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 CHST5Q9GZS9 411 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 CCDC59Q9P031 241 aaKnown RBP10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 CLEC2DQ9UHP7 191 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 OR52A1Q9UKL2 312 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 GTF2A1LQ9UNN4 478 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 FBXO7Q9Y3I1 522 aa10.32□□□□□ -0.76
VCPKMT-201ENST00000395859 CNIH1O95406 144 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 BLVRBP30043 206 aaPredicted RBP10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 ZNF137PP52743 207 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 GBX2P52951 348 aaPredicted RBP10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 PAX5Q02548 391 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 ATXN7L3Q14CW9 347 aaPredicted RBP10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 RPL22L1Q6P5R6 122 aaKnown RBP10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 LHFPL3Q86UP9 236 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 Q8N402 240 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 C8orf31Q8N9H6 132 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 ZNF565Q8N9K5 539 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 CHST4Q8NCG5 386 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 CCDC54Q8NEL0 328 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 PLEKHA1Q9HB21 404 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 PLA2G2EQ9NZK7 142 aa10.31□□□□□ -0.76
VCPKMT-201ENST00000395859 A0A1W2PQL4 384 aaPredicted RBP10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 OGG1O15527 345 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 GATBO75879 557 aaKnown RBP10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 IGHV3-11P01762 117 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 KRT8P05787 483 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 CSN3P07498 182 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 GLP1RP43220 463 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 CDK5R1Q15078 307 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 SSX1Q16384 188 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 LCN12Q6JVE5 192 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 FDX2Q6P4F2 183 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 FAM220AQ7Z4H9 259 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 DEFB125Q8N687 156 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 DNAAF1Q8NEP3 725 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 OR9G4Q8NGQ1 327 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 RFESDQ8TAC1 157 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 DYNC2LI1Q8TCX1 351 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 S100ZQ8WXG8 99 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 BORCS8Q96FH0 119 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 TTTY10Q9BZA0 68 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 WFDC10AQ9H1F0 79 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 PARP11Q9NR21 331 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 ING3Q9NXR8 418 aa10.3□□□□□ -0.76
VCPKMT-201ENST00000395859 KIF25Q9UIL4 384 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms