RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF554Q86TJ5 538 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 OR5R1Q8NH85 324 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 S100ZQ8WXG8 99 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 AKIP1Q9NQ31 210 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 OR2S2Q9NQN1 319 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 GNG12Q9UBI6 72 aa13.35□□□□□ -0.27
CXCL1-201ENST00000395761 ELF5Q9UKW6 265 aaPredicted RBP13.35□□□□□ -0.27
CXCL1-201ENST00000395761 BTBD17A6NE02 478 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 TMEM235A6NFC5 223 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 SLC31A2O15432 143 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 CD3GP09693 182 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 PRSS3P35030 304 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 ZNF134P52741 427 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 IL18Q14116 193 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 DIAPH2-AS1Q14236 149 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 GNMTQ14749 295 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 SRSF7Q16629 238 aaKnown RBP eCLIP13.34□□□□□ -0.27
CXCL1-201ENST00000395761 TPTE2P1Q5T6R2 138 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 FAM131AQ6UXB0 335 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 ZNF439Q8NDP4 499 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 GCDHQ92947 438 aaPredicted RBP13.34□□□□□ -0.27
CXCL1-201ENST00000395761 SCPEP1Q9HB40 452 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 Q9N2K0 584 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
CXCL1-201ENST00000395761 TMEM89A2RUT3 159 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 HKR1P10072 659 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 DTYMKP23919 212 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 MORN2Q502X0 79 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 CT45A1Q5HYN5 189 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 MOB1BQ7L9L4 216 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 MFSD4AQ8N468 514 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 OR10X1Q8NGY0 326 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 CT45A3Q8NHU0 189 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 GPX8Q8TED1 209 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 IL1F10Q8WWZ1 152 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 CREB3L1Q96BA8 519 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 GALMQ96C23 342 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 OCSTAMPQ9BR26 566 aa13.33□□□□□ -0.28
CXCL1-201ENST00000395761 ZNF230Q9UIE0 474 aaPredicted RBP13.33□□□□□ -0.28
CXCL1-201ENST00000395761 GABARAPH6UMI1 98 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 GSTZ1O43708 216 aaPredicted RBP13.32□□□□□ -0.28
CXCL1-201ENST00000395761 SSX5O60225 188 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 SCTP09683 121 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 PTHLHP12272 177 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 CD24P25063 80 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 PPP1CCP36873 323 aaKnown RBP13.32□□□□□ -0.28
CXCL1-201ENST00000395761 CEACAM3P40198 252 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 CBX5P45973 191 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 GNG2P59768 71 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 MRPS15P82914 257 aaKnown RBP13.32□□□□□ -0.28
CXCL1-201ENST00000395761 HTD2P86397 168 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 RELBQ01201 579 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 ZNF79Q15937 498 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 TMEM30BQ3MIR4 351 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 CCBE1Q6UXH8 406 aaPredicted RBP13.32□□□□□ -0.28
CXCL1-201ENST00000395761 SNX29P2Q8IUI4 249 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 C8orf31Q8N9H6 132 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 MAFIPQ8WZ33 124 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 ABCB10Q9NRK6 738 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 C1RLQ9NZP8 487 aa13.32□□□□□ -0.28
CXCL1-201ENST00000395761 AMMECR1Q9Y4X0 333 aaPredicted RBP13.32□□□□□ -0.28
CXCL1-201ENST00000395761 CRYBA1P05813 215 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 LPLP06858 475 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 FCGR3AP08637 254 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 DYNLT3P51808 116 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 HLA-DRB3P79483 266 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 MADCAM1Q13477 382 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 Q3ZCU0 254 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 FBLN7Q53RD9 439 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 Q6ZS49 121 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 SLC25A48Q6ZT89 311 aaKnown RBP13.31□□□□□ -0.28
CXCL1-201ENST00000395761 GDPD1Q8N9F7 314 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 SMIM4Q8WVI0 70 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 NUDCD2Q8WVJ2 157 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 FCAMRQ8WWV6 532 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 TOMM40LQ969M1 308 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 RPEQ96AT9 228 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 SRRQ9GZT4 340 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 JPT1Q9UK76 154 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 ANAPC10Q9UM13 185 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 MGAT4AQ9UM21 535 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 TCF19Q9Y242 345 aa13.31□□□□□ -0.28
CXCL1-201ENST00000395761 IGKV1-6A0A0C4DH72 117 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 A6NDX4 124 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 TRDCB7Z8K6 153 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 CHST1O43916 411 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 NAT1P18440 290 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 SSBP1Q04837 148 aaKnown RBP13.3□□□□□ -0.28
CXCL1-201ENST00000395761 TMEM219Q86XT9 240 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 SPATA3Q8NHX4 192 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
CXCL1-201ENST00000395761 OR1A1Q9P1Q5 309 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 MTFP1Q9UDX5 166 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 STAB1Q9NY15 2570 aa13.3□□□□□ -0.28
CXCL1-201ENST00000395761 TENM1Q9UKZ4 2725 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 IGKV1D-8A0A087WSZ0 117 aa13.29□□□□□ -0.28
CXCL1-201ENST00000395761 OOSP1A8MZH6 123 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms