RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 RSPO4Q2I0M5 234 aaPredicted RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 HOGA1Q86XE5 327 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 PTP4A3O75365 173 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 HYPMO75409 117 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 MC5RP33032 325 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 PDLIM4P50479 330 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 EFNB2P52799 333 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 FGF12P61328 243 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ELOBQ15370 118 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 HIST3H3Q16695 136 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF826PQ6ZT77 177 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 F5P12259 2224 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ASCC3Q8N3C0 2202 aaKnown RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 COL24A1Q17RW2 1714 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 STRCP1A6NGW2 1772 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 UBE2L6O14933 153 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 DLK1P80370 383 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 LRRC75BQ2VPJ9 315 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 LDLRAD3Q86YD5 345 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 C10orf111Q8N326 155 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 CHAC2Q8WUX2 184 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM191AQ9H0A3 160 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ST6GALNAC2Q9UJ37 374 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 HS3ST3B1Q9Y662 390 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 CEACAM18A8MTB9 384 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 CDS2O95674 445 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF735P0CB33 412 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 FCARP24071 287 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 CEBPDP49716 269 aaPredicted RBP9□□□□□ -0.97
COL4A6-203ENST00000394872 UNQ5815/PRO19632Q6UWF5 114 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 SCMH1Q96GD3 660 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM140Q9NV12 185 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 KLK13Q9UKR3 277 aa9□□□□□ -0.97
COL4A6-203ENST00000394872 A0A1W2PS18 150 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 NPIPB8E9PQR5 432 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 MEOX2P50222 304 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 SNX22Q96L94 193 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 LEUTXA8MZ59 168 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 MPV17P39210 176 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 AWAT1Q58HT5 328 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF841Q6ZN19 808 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF645Q8N7E2 425 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF738Q8NE65 137 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 DNASE2BQ8WZ79 361 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 TRBV5-3A0A0A0MS03 114 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 NUBP1P53384 320 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 DLX1P56177 255 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 SLC25A53Q5H9E4 307 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 NEURL2Q9BR09 285 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM74BQ9NUR3 256 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 MIOXQ9UGB7 285 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 ISLRO14498 428 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 PRSS23O95084 383 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 APCSP02743 223 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 TWIST1Q15672 202 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 COX19Q49B96 90 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 FAM74A3Q4VXF1 159 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 GPX7Q96SL4 187 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-203ENST00000394872 GPA33Q99795 319 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 FOXJ2Q9P0K8 574 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 LOC101059948A0A1B0GTJ6 334 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 PGA5P0DJD9 388 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 SMAGPQ0VAQ4 97 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 HCP5Q6MZN7 132 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 OR8G5Q8NG78 346 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 MIXL1Q9H2W2 232 aa8.99□□□□□ -0.97
COL4A6-203ENST00000394872 PPIAL4CA0A0B4J2A2 164 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 PPIAL4GP0DN37 164 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 SLC16A13Q7RTY0 426 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 LRRC75AQ8NAA5 344 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 OR8A1Q8NGG7 326 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 SFXN3Q9BWM7 321 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 KNL1Q8NG31 2342 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 NDUFA2O43678 99 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM78Q5T7P6 136 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 LOC105371242A0A075B767 164 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 CGB1A6NKQ9 187 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 B4DEV8 164 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 OVCH2Q7RTZ1 564 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 MRGPRGQ86SM5 289 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 TMEM204Q9BSN7 226 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 CTXND1A0A1B0GTU2 59 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 CORTO00230 105 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 WNT9BO14905 357 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 PITX3O75364 302 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 NANOS3P60323 173 aaKnown RBP8.98□□□□□ -0.97
COL4A6-203ENST00000394872 FAM216AQ8WUB2 273 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 DCTN5Q9BTE1 182 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF880Q6PDB4 577 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 SYT8Q8NBV8 401 aa8.98□□□□□ -0.97
COL4A6-203ENST00000394872 ZNF207O43670 478 aaKnown RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 HIST1H1BP16401 226 aaKnown RBP8.97□□□□□ -0.97
COL4A6-203ENST00000394872 SLC25A47Q6Q0C1 308 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 PCSK4Q6UW60 755 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 PRSS27Q9BQR3 290 aa8.97□□□□□ -0.97
COL4A6-203ENST00000394872 PCM1Q15154 2024 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms