RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SCTP09683 121 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 CD3GP09693 182 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 FAM106CPP0CH98 169 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 SMIM18P0DKX4 95 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 CD28P10747 220 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 TMEM11P17152 192 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 VDAC2P45880 294 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR3A3P47888 321 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB7AP51149 207 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 HLA-DRB3P79483 266 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF816Q0VGE8 651 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 IDNKQ5T6J7 187 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 SLC16A12Q6ZSM3 486 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 ODF3L1Q8IXM7 274 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 C8orf31Q8N9H6 132 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR5H6Q8NGV6 325 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR10R2Q8NGX6 335 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 SGMS2Q8NHU3 365 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 ST6GALNAC6Q969X2 333 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 GALMQ96C23 342 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB3CQ96E17 227 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 YIPF6Q96EC8 236 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 CMSS1Q9BQ75 279 aaKnown RBP6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 MRPL20Q9BYC9 149 aaKnown RBP6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 PRSS22Q9GZN4 317 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 ATG5Q9H1Y0 275 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 IFI27L2Q9H2X8 130 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF696Q9H7X3 374 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 Q9N2K0 584 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 C12orf4Q9NQ89 552 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 ABRACLQ9P1F3 81 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 SLC23A1Q9UHI7 598 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 HSF4Q9ULV5 492 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 KIAA2026Q5HYC2 2103 aa6.11□□□□□ -1.43
HMGB3P1-201ENST00000393368 VWFP04275 2813 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 IGKV1D-8A0A087WSZ0 117 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 SAA2-SAA4A0A096LPE2 208 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 MFNGO00587 321 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 RRP9O43818 475 aaKnown RBP6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 PEX14O75381 377 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 FCGR3AP08637 254 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 SAA2P0DJI9 122 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 HIST1H1DP16402 221 aaKnown RBP6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB6AP20340 208 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 IL3RAP26951 378 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 HTD2P86397 168 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 HERPUD1Q15011 391 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 PRR31Q5SQ13 230 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 MOB1BQ7L9L4 216 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF554Q86TJ5 538 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 TGIF2LXQ8IUE1 241 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 IZUMO1Q8IYV9 350 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR8H3Q8N146 312 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 Q8N2B8 174 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 DTX3Q8N9I9 347 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 OR2AK2Q8NG84 335 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 ABHD14BQ96IU4 210 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 EAF1Q96JC9 268 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 RITA1Q96K30 269 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 RAB9BQ9NP90 201 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 LINC00527Q9UJ94 153 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 RNF150Q9ULK6 438 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 MOB4Q9Y3A3 225 aa6.1□□□□□ -1.43
HMGB3P1-201ENST00000393368 MEGF8Q7Z7M0 2845 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 TRBV6-6A0A0A6YYG2 114 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 TMEM235A6NFC5 223 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 TRIM64CA6NLI5 447 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 LINC01548A6NM66 108 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 HSPA12AO43301 675 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 AIREO43918 545 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 YPEL1O60688 119 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 GSTT2P0CG29 244 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 GSTT2BP0CG30 244 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 CNTFRP26992 372 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 CEACAM6P40199 344 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF137PP52743 207 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 LINC00205P59089 165 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 NCS1P62166 190 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 MRPS15P82914 257 aaKnown RBP6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 LSAMPQ13449 338 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 ARFRP1Q13795 201 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 NSUN5P1Q3KNT7 163 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 TMEM30BQ3MIR4 351 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 Q3ZCU0 254 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 IGSF11Q5DX21 431 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 C11orf88Q6PI97 169 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 TREML4Q6UXN2 200 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 GLDNQ6ZMI3 551 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 ZNF833PQ6ZTB9 187 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 C16orf82Q7Z2V1 217 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 TPRA1Q86W33 373 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 THNSL2Q86YJ6 484 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 Q8N6K4 173 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 C5orf56Q8N8D9 126 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 FAM110DQ8TAY7 271 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 NUDCD2Q8WVJ2 157 aa6.09□□□□□ -1.43
HMGB3P1-201ENST00000393368 SLC25A38Q96DW6 304 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms