RNA–Protein interactions for RNA: ENST00000390490.1

TRAJ47-201, Transcript of T cell receptor alpha joining 47, humanhuman

APPRIS P1 BASIC

Gene TRAJ47, Length 57 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ47-201ENST00000390490 TRBV24-1A0A075B6N3 115 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 A0A0B4J2C4 111 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 IGKV1-12A0A0C4DH73 117 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 A0A1W2PQL4 384 aaPredicted RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 LINC00862A6NCI5 91 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 LRCOL1A6NCL2 159 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 A6NED7 52 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 TMEM114B3SHH9 223 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 C4orf51C9J302 202 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 D6RAR5 112 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 H3BMM0 161 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 H3BQ85 93 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 MRASO14807 208 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 EEF1E1O43324 174 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 DENRO43583 198 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 DEDDO75618 318 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 STK16O75716 305 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 IGKV1D-12P01611 117 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 IGHV3-53P01767 116 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 TNNC2P02585 160 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 IFNA16P05015 189 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 REG1AP05451 166 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 PFN1P07737 140 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HIST1H1EP10412 219 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 UCHL3P15374 230 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 CD36P16671 472 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ZNF708P17019 499 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 PRPS1L1P21108 318 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 CDK2P24941 298 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 DDTP30046 118 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HOXA6P31267 233 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HSPA9P38646 679 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 PMELP40967 661 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OMPP47874 163 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 AP3S2P59780 193 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 KRTAP10-5P60370 271 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 SNAP25P60880 206 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 NAA20P61599 178 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 RPS24P62847 133 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HERVK_113P63121 156 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HLA-DRB3P79483 266 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 BASP1P80723 227 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 FABP5Q01469 135 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 DEFA6Q01524 100 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 BSPH1Q075Z2 132 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 AESQ08117 197 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 TSPAN31Q12999 210 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR2F1Q13607 317 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 APOFQ13790 326 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 IHHQ14623 411 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 PDGFRLQ15198 375 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 RSU1Q15404 277 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 BATFQ16520 125 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 TMEM31Q5JXX7 168 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 DNLZQ5SXM8 178 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 C10orf91Q5T1B1 145 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 SYPL2Q5VXT5 272 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ZFAND6Q6FIF0 208 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR10K2Q6IF99 312 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 SPOPLQ6IQ16 392 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 C8orf74Q6P047 294 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 Q6ZQT7 251 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ADM2Q7Z4H4 148 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 LYZL2Q7Z4W2 148 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 NIT1Q86X76 327 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ZNF567Q8N184 647 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 RPRMLQ8N4K4 120 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 RNF182Q8N6D2 247 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 TMEM161BQ8NDZ6 487 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ZNF680Q8NEM1 530 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 BPIFB6Q8NFQ5 453 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR1M1Q8NGA1 313 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 GPR32P1Q8NGA4 272 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR11G2Q8NGC1 345 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR1P1Q8NH06 330 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR2V1Q8NHB1 315 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 JOSD2Q8TAC2 188 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 C16orf78Q8WTQ4 265 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 Q8WTZ3 238 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ASB17Q8WXJ9 295 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HIST1H2BAQ96A08 127 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 UBE2WQ96B02 151 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OTUB2Q96DC9 234 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 RMI2Q96E14 147 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ANKRD36BP1Q96IX9 119 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 SLC35G5Q96KT7 338 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ZNF2Q9BSG1 426 aaPredicted RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 CCDC94Q9BW85 323 aaPredicted RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 GNB1LQ9BYB4 327 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR2D2Q9H210 308 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR51I1Q9H343 314 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 OR51I2Q9H344 312 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 ZNF286AQ9HBT8 521 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 HES4Q9HCC6 221 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 EMC3Q9P0I2 261 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 SLC23A2Q9UGH3 650 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 RPUSD1Q9UJJ7 312 aaKnown RBP0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 SLC22A13Q9Y226 551 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 WASHC3Q9Y3C0 194 aa0.78□□□□□ -2.28
TRAJ47-201ENST00000390490 FIS1Q9Y3D6 152 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms