RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PIAS2O75928 621 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 OR2J2O76002 312 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 SYNGR4O95473 234 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 CTSSP25774 331 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 UCP1P25874 307 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 ADMP35318 185 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 ARL16Q0P5N6 197 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 SPIN3Q5JUX0 258 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 FREM2Q5SZK8 3169 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 A0A0U1RQV5 110 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 CTRLP40313 264 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 SLC25A47Q6Q0C1 308 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 OR4F5Q8NH21 305 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 BTF3L4Q96K17 158 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 OR6C6A6NF89 314 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 LILRA5A6NI73 299 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 KIAA1324LA8MWY0 1029 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 ZNF814B7Z6K7 855 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 PLA2G5P39877 138 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 OR4B1Q8NGF8 309 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM234Q8WY98 164 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.4
VPS9D1-201ENST00000389386 LIPT2A6NK58 231 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1D-33P01593 117 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1-33P01594 117 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 WNT2P09544 360 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 NXPH1P58417 271 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 PPP1CBP62140 327 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 FOXL1Q12952 345 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 C16orf47Q6ZP98 133 aaPredicted RBP12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF818PQ6ZRF7 136 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 OR5T1Q8NG75 326 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 PATZ1Q9HBE1 687 aaKnown RBP12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF160Q9HCG1 818 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 LAMTOR2Q9Y2Q5 125 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 IGHV3-20A0A0C4DH32 117 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 CBY3A6NI87 242 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 MLNRO43193 412 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 YPEL3P61236 119 aaPredicted RBP12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 MSMO1Q15800 293 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 PIGYQ3MUY2 71 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 C1orf185Q5T7R7 199 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 OR8G2PQ6IF36 304 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 Q6ZSR3 168 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 TCF23Q7RTU1 214 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 HAPLN4Q86UW8 402 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 GAPTQ8N292 157 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 SLC25A45Q8N413 288 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 OR5AU1Q8NGC0 362 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 RBM24Q9BX46 236 aaKnown RBP12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
VPS9D1-201ENST00000389386 A0A1W2PNV4 684 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 HS3ST1O14792 307 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 SERF1AO75920 110 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 IGHG1P01857 330 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 OR8B8Q15620 311 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 CARD17Q5XLA6 110 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 HLA-DQA1Q5Y7H0 255 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF709Q8N972 641 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 Q8N976 141 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 SEPSECSQ9HD40 501 aaKnown RBP12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 ELOVL5Q9NYP7 299 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 SH3BGRL2Q9UJC5 107 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 IGHV1OR21-1A0A087WYE8 117 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 A0A0G2JRQ6 117 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 F5H5K5 113 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 PPBPP02775 128 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 CD99P14209 185 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 RPS18P62269 152 aaKnown RBP12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 SHBQ15464 509 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 NSDHLQ15738 373 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 RSPO4Q2I0M5 234 aaPredicted RBP12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 CADM4Q8NFZ8 388 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
VPS9D1-201ENST00000389386 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 TMEM238C9JI98 176 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 HMGB3O15347 200 aaKnown RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 NPPCP23582 126 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 LHX2P50458 406 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 Q6ZVH6 145 aa12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 MYPOPQ86VE0 399 aaPredicted RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
VPS9D1-201ENST00000389386 ALKBH4Q9NXW9 302 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms