RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 CXXC4Q9H2H0 198 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 ASCL3Q9NQ33 180 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 GPR37O15354 613 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 IFNA5P01569 189 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 SNRNP70P08621 437 aaKnown RBP12.6□□□□□ -0.39
SCFD2-201ENST00000388940 KITLGP21583 273 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 HOXC12P31275 282 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 TLE4Q04727 773 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 C14orf79Q96F83 325 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 UNKLQ9H9P5 680 aaKnown RBP12.6□□□□□ -0.39
SCFD2-201ENST00000388940 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 KCNS2Q9ULS6 477 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 FAM90A26D6RGX4 464 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 PSPNO60542 156 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 HBE1P02100 147 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 MT-ND4LP03901 98 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 RUNX1Q01196 453 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 MSMO1Q15800 293 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 CNEP1R1Q8N9A8 125 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 HIST1H2BAQ96A08 127 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 RBMXL1Q96E39 390 aaKnown RBP12.59□□□□□ -0.39
SCFD2-201ENST00000388940 RARRES2Q99969 163 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
SCFD2-201ENST00000388940 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 PRR33A8MZF0 331 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 M0R036 132 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 OR8U8P0C7N1 319 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 FTH1P19P0C7X4 201 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 AKIRIN2Q53H80 203 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 SOHLH1Q5JUK2 328 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 NIT2Q9NQR4 276 aa12.58□□□□□ -0.39
SCFD2-201ENST00000388940 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 OOEPA6NGQ2 149 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 WDR1O75083 606 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 FBP1P09467 338 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 RAB2AP61019 212 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
SCFD2-201ENST00000388940 IZUMO4Q1ZYL8 232 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 VWA1Q6PCB0 445 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 ACP7Q6ZNF0 438 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 GALMQ96C23 342 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 PARD6GQ9BYG4 376 aaPredicted RBP12.58□□□□□ -0.4
SCFD2-201ENST00000388940 PSENENQ9NZ42 101 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 OR14J1Q9UGF5 321 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 MMP24Q9Y5R2 645 aa12.58□□□□□ -0.4
SCFD2-201ENST00000388940 A0A1B0GV50 99 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF891A8MT65 544 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 WISP2O76076 250 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 AGFG2O95081 481 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 IGLV1-44P01699 117 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 AKR1C3P42330 323 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 EIF4EBP1Q13541 118 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF506Q5JVG8 444 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 CD300LFQ8TDQ1 290 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 PSMG3Q9BT73 122 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 KIAA2026Q5HYC2 2103 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 A0A1B0GWJ7 208 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF729A6NN14 1252 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 AHRRA9YTQ3 701 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 H3BP45 60 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 IFNL4K9M1U5 179 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 HSPB1P04792 205 aaKnown RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 SRP19P09132 144 aaKnown RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF16P17020 682 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 PTAFRP25105 342 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 CEBPDP49716 269 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 RAB5BP61020 215 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
SCFD2-201ENST00000388940 IGF2-ASQ6U949 168 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF525Q8N782 197 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 DEFB124Q8NES8 71 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 OR1L1Q8NH94 360 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 UBALD1Q8TB05 177 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
SCFD2-201ENST00000388940 CACNA1GO43497 2377 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
SCFD2-201ENST00000388940 CECR9P0C854 216 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 MAS1LP35410 378 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 OR3A1P47881 315 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 HBG1P69891 147 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 HBG2P69892 147 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 HABP2Q14520 560 aaPredicted RBP12.56□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 ACSF3Q4G176 576 aaPredicted RBP12.56□□□□□ -0.4
SCFD2-201ENST00000388940 MBNL2Q5VZF2 373 aaKnown RBP12.56□□□□□ -0.4
SCFD2-201ENST00000388940 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 ZNF826PQ6ZT77 177 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 SLC16A13Q7RTY0 426 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
SCFD2-201ENST00000388940 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms