RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CRYM-AS1A6NIL9 109 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 M0R036 132 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 MT-ND4LP03901 98 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 CTSDP07339 412 aaPredicted RBP10.47□□□□□ -0.73
CIITA-202ENST00000381835 SMIM6P0DI80 62 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 SNCAP37840 140 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 KRBOX4Q5JUW0 171 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 RBMS3Q6XE24 437 aaKnown RBP10.47□□□□□ -0.73
CIITA-202ENST00000381835 ERGIC1Q969X5 290 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 OR2V2Q96R30 315 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 EIF5A2Q9GZV4 153 aaKnown RBP10.47□□□□□ -0.73
CIITA-202ENST00000381835 PLEKHA2Q9HB19 425 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 IL36RNQ9UBH0 155 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 POLDIP2Q9Y2S7 368 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 ARID1AO14497 2285 aa10.47□□□□□ -0.73
CIITA-202ENST00000381835 C7orf77A4D0Y5 90 aa10.46□□□□□ -0.73
CIITA-202ENST00000381835 UBE2CO00762 179 aa10.46□□□□□ -0.73
CIITA-202ENST00000381835 RBM11P57052 281 aaKnown RBP10.46□□□□□ -0.73
CIITA-202ENST00000381835 RELQ04864 619 aaPredicted RBP10.46□□□□□ -0.73
CIITA-202ENST00000381835 MZT1Q08AG7 82 aa10.46□□□□□ -0.73
CIITA-202ENST00000381835 GUK1Q16774 197 aa10.46□□□□□ -0.73
CIITA-202ENST00000381835 HDHD3Q9BSH5 251 aaPredicted RBP10.46□□□□□ -0.73
CIITA-202ENST00000381835 SPACA1Q9HBV2 294 aa10.46□□□□□ -0.73
CIITA-202ENST00000381835 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.73
CIITA-202ENST00000381835 BORCS7-ASMTA0A0B4J1R7 106 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 FABP1P07148 127 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 DUSP1P28562 367 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 CAMLGP49069 296 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 FGF12P61328 243 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 SPRNQ5BIV9 151 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 C11orf53Q8IXP5 236 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 ZCCHC24Q8N2G6 241 aaKnown RBP10.46□□□□□ -0.74
CIITA-202ENST00000381835 COMMD1Q8N668 190 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 ISOC2Q96AB3 205 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 KCNIP3Q9Y2W7 256 aa10.46□□□□□ -0.74
CIITA-202ENST00000381835 E5RGE8 158 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 CA11O75493 328 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 OR7C1O76099 320 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 IGHV1-46P01743 117 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 RNF224P0DH78 156 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 LOXP28300 417 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 APOBEC3AP31941 199 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 CD200P41217 278 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 HOXA4Q00056 320 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 BRICD5Q6PL45 260 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 Q8NFD4 153 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 ITLN1Q8WWA0 313 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 PPP1R14DQ9NXH3 145 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 ANXA10Q9UJ72 324 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 ZDHHC8Q9ULC8 765 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 NXPH2O95156 264 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 MBPP02686 304 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 SEC11BP0C7V7 166 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 DANCRP0C864 163 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 PGA5P0DJD9 388 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 OR5H8P0DN80 308 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 DAOP14920 347 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 GLP1RP43220 463 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 PIGPP57054 158 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 TNFAIP6P98066 277 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 FABP9Q0Z7S8 132 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 SP6Q3SY56 376 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 WDR82Q6UXN9 313 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 TOMM40LQ969M1 308 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 BSCL2Q96G97 398 aaPredicted RBP10.45□□□□□ -0.74
CIITA-202ENST00000381835 MEGF10Q96KG7 1140 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 ZNF251Q9BRH9 671 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 TUBA4BQ9H853 241 aa10.45□□□□□ -0.74
CIITA-202ENST00000381835 DYSFO75923 2080 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 A0A1W2PPE3 182 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 A0A1W2PPH5 198 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 LINC00587B1AMM8 73 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 PRH1P02810 166 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 TNFSF4P23510 183 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 CCL8P80075 99 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
CIITA-202ENST00000381835 ABCA11PQ4W5N1 156 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 TMEM204Q9BSN7 226 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 ARV1Q9H2C2 271 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 NIT2Q9NQR4 276 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
CIITA-202ENST00000381835 C17orf100A8MU93 164 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 WNT9BO14905 357 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 GPR137BO60478 399 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 DIRAS3O95661 229 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 RAB5AP20339 215 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 FHITP49789 147 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 DAZAP2Q15038 168 aaPredicted RBP10.44□□□□□ -0.74
CIITA-202ENST00000381835 MOGAT3Q86VF5 341 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 Q8IYB0 196 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 FAAP24Q9BTP7 215 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 DYNLRB1Q9NP97 96 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 C19orf12Q9NSK7 152 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 DECR2Q9NUI1 292 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 IL19Q9UHD0 177 aa10.44□□□□□ -0.74
CIITA-202ENST00000381835 LRRK2Q5S007 2527 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms