RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 S1PR2O95136 353 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 NGFRP08138 427 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 AMY2BP19961 511 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 FABP6P51161 128 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF793Q6ZN11 406 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 TUSC5Q8IXB3 177 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 TM2D1Q9BX74 207 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SERTAD4Q9NUC0 356 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 DHDHQ9UQ10 334 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SDK1Q7Z5N4 2213 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 OTOL1A6NHN0 477 aaPredicted RBP8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SIRPB1O00241 398 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
PTPRA-204ENST00000380393 PGCP20142 388 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 PRTGQ2VWP7 1150 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SFTPA1Q8IWL2 248 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 RPP25Q9BUL9 199 aaKnown RBP8.05□□□□□ -1.12
PTPRA-204ENST00000380393 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
PTPRA-204ENST00000380393 FGF21Q9NSA1 209 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 JKAMPQ9P055 326 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SCN3AQ9NY46 2000 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 A0A1W2PPV4 95 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 MEGF11A6BM72 1044 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 J3QR89 54 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 PITX3O75364 302 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 WNT2P09544 360 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 NTF3P20783 257 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 CLDN17P56750 224 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 NRN1LQ496H8 165 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 MRPL2Q5T653 305 aaKnown RBP8.04□□□□□ -1.12
PTPRA-204ENST00000380393 CDCP2Q5VXM1 449 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 OR2K2Q8NGT1 345 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 ZPLD1Q8TCW7 415 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 TMEM171Q8WVE6 324 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 NAA38Q9BRA0 125 aaKnown RBP8.04□□□□□ -1.12
PTPRA-204ENST00000380393 SCN2AQ99250 2005 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 NRASP01111 189 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 KRASP01116 189 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 GPM6AP51674 278 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 YPEL3P61236 119 aaPredicted RBP8.04□□□□□ -1.12
PTPRA-204ENST00000380393 GAGE5Q13069 117 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 GAGE6Q13070 117 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 TESK1Q15569 626 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 CD226Q15762 336 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 Q56UQ5 140 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 WDR38Q5JTN6 314 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 LINC00346Q8IVM7 164 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 OR10X1Q8NGY0 326 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 SGMS2Q8NHU3 365 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 NINJ1Q92982 152 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 GALMQ96C23 342 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 RAB1BQ9H0U4 201 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 KNL1Q8NG31 2342 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 TRPM6Q9BX84 2022 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 SPAG17Q6Q759 2223 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 IGSF23A1L1A6 192 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
PTPRA-204ENST00000380393 CST7O76096 145 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 SERPINE2P07093 398 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 MEF2BQ02080 365 aaPredicted RBP8.04□□□□□ -1.12
PTPRA-204ENST00000380393 SP6Q3SY56 376 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF562Q6V9R5 426 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 SLC25A44Q96H78 314 aaPredicted RBP8.04□□□□□ -1.12
PTPRA-204ENST00000380393 C4orf45Q96LM5 186 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 KIF26BQ2KJY2 2108 aa8.04□□□□□ -1.12
PTPRA-204ENST00000380393 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-204ENST00000380393 H3BUT2 72 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 F2RL2O00254 374 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 SLC33A1O00400 549 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ABHD16AO95870 558 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 FSTP19883 344 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 HLA-DRB5Q30154 266 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ASTLQ6HA08 431 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF841Q6ZN19 808 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 HAPLN4Q86UW8 402 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 TRAPPC2LQ9UL33 140 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 SNAI2O43623 268 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 CA2P00918 260 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 CA7P43166 264 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 NPBWR2P48146 333 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 Q0VG73 95 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 GNB4Q9HAV0 340 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ST20Q9HBF5 79 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 RPRMQ9NS64 109 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 BOKQ9UMX3 212 aaPredicted RBP8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ARHGAP21Q5T5U3 1957 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF737O75373 536 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF728P0DKX0 622 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 DNASE1L1P49184 302 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 DYNLT3P51808 116 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 FMODQ06828 376 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 RNFT1Q5M7Z0 435 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 LY6G5CQ5SRR4 150 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 LYZL2Q7Z4W2 148 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 LHFPL1Q86WI0 220 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 CT55Q8WUE5 264 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 RLN3Q8WXF3 142 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 SPATA25Q9BR10 227 aa8.03□□□□□ -1.12
PTPRA-204ENST00000380393 CLEC7AQ9BXN2 247 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms