RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PLAC9Q5JTB6 97 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 BAGE3Q86Y29 109 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 BAGE2Q86Y30 109 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 OR5C1Q8NGR4 320 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 CCL4L1Q8NHW4 92 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 NAT6Q93015 286 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 NPVFQ9HCQ7 196 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 PPP1R3CQ9UQK1 317 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 LAMA3Q16787 3333 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 A0A0A6YYD4 124 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 ARPC3O15145 178 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 ZNF205O95201 554 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 HLA-HP01893 362 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 LIPFP07098 398 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 CELA3BP08861 270 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 AMY2BP19961 511 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 CXCL12P48061 93 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 ZNF133P52736 654 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-201ENST00000379989 PPP1CBP62140 327 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 MRPS34P82930 218 aaKnown RBP6.41□□□□□ -1.38
CDKL5-201ENST00000379989 SP6Q3SY56 376 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 SPIN3Q5JUX0 258 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 OTPQ5XKR4 325 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 WASHC3Q9Y3C0 194 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 MEGF11A6BM72 1044 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 NKX2-6A6NCS4 301 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 LMX1BO60663 402 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 TSPAN13O95857 204 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 GYPAP02724 150 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 TIMP3P35625 211 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 LCN6P62502 163 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 HERV-K104P63124 156 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 RELBQ01201 579 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 TLE1Q04724 770 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 RAB31Q13636 194 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 ODF3L1Q8IXM7 274 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 LMX1AQ8TE12 382 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 TAAR6Q96RI8 345 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 ELOVL3Q9HB03 270 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 SRA1Q9HD15 236 aaKnown RBP6.41□□□□□ -1.38
CDKL5-201ENST00000379989 PLEKHJ1Q9NW61 149 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 PCNX3Q9H6A9 2034 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 IGLV3-12A0A075B6K2 115 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 IGKV3D-11A0A0A0MRZ8 115 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 C2orf72A6NCS6 295 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 GAGE10A6NGK3 116 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 FOXS1O43638 330 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 NUDT3O95989 172 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 ARL4DP49703 201 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 EMDP50402 254 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 DYNLT3P51808 116 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 TCTEX1D4Q5JR98 221 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 CPEB2Q7Z5Q1 589 aaKnown RBP6.4□□□□□ -1.38
CDKL5-201ENST00000379989 SULF2Q8IWU5 870 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 TSPAN32Q96QS1 320 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 SSBP4Q9BWG4 385 aaPredicted RBP6.4□□□□□ -1.38
CDKL5-201ENST00000379989 VSIRQ9H7M9 311 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 RPRMQ9NS64 109 aa6.4□□□□□ -1.38
CDKL5-201ENST00000379989 A0A1B0GWA3 101 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 P2RY10O00398 339 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 SOCS1O15524 211 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 IGLL1P15814 213 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 IGFBP4P22692 258 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 CSNK2A1P68400 391 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-201ENST00000379989 CCDC144NLQ6NUI1 221 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 CSNK2A3Q8NEV1 391 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 DERL1Q9BUN8 251 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 PLEK2Q9NYT0 353 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 PEF1Q9UBV8 284 aaKnown RBP6.4□□□□□ -1.39
CDKL5-201ENST00000379989 RBMXL2O75526 392 aaKnown RBP6.4□□□□□ -1.39
CDKL5-201ENST00000379989 CCNOP22674 350 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 DUSP1P28562 367 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 OPRM1P35372 400 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 AMTP48728 403 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 DNASE1L1P49184 302 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 Q0VG73 95 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM187Q14656 261 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 IGFBP7Q16270 282 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 MEP1BQ16820 701 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 C1orf140Q5VVS0 124 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 HAPLN4Q86UW8 402 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 TMEM252Q8N6L7 170 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-201ENST00000379989 ST6GALNAC5Q9BVH7 336 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 GEMIN7Q9H840 131 aaKnown RBP6.4□□□□□ -1.39
CDKL5-201ENST00000379989 NXT1Q9UKK6 140 aaKnown RBP6.4□□□□□ -1.39
CDKL5-201ENST00000379989 B9D1Q9UPM9 204 aa6.4□□□□□ -1.39
CDKL5-201ENST00000379989 IGHV1OR21-1A0A087WYE8 117 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 NPIPB13A6NJU9 1138 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 NPIPB4C9JG80 1138 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 H3BMH7 237 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 H7C1C5 153 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 K7EQM0 130 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 CST7O76096 145 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 MT-ATP6P00846 226 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 TTRP02766 147 aa6.39□□□□□ -1.39
CDKL5-201ENST00000379989 HIST1H1DP16402 221 aaKnown RBP6.39□□□□□ -1.39
CDKL5-201ENST00000379989 CBLN1P23435 193 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms