RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 HERPUD1Q15011 391 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 ABCA11PQ4W5N1 156 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 FAM209BQ5JX69 171 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 ZNF497Q6ZNH5 498 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 SSX8Q7RTT4 187 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 LYZL2Q7Z4W2 148 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 NUP37Q8NFH4 326 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 WFIKKN1Q96NZ8 548 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 PRORYQ9H606 182 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 NAA60Q9H7X0 242 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 FAM212BQ9NTI7 297 aaPredicted RBP16.33■□□□□ 0.2
SSU72-204ENST00000378726 IGKV1-6A0A0C4DH72 117 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 E5RGE8 158 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 H7C1Q1 480 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 LMO1P25800 156 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 PAX6P26367 422 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 LRRC29Q8WV35 223 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 OR2V2Q96R30 315 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 NSG2Q9Y328 171 aa16.32■□□□□ 0.2
SSU72-204ENST00000378726 ATXN7O15265 892 aaPredicted RBP16.31■□□□□ 0.2
SSU72-204ENST00000378726 PTBP3O95758 552 aaKnown RBP16.31■□□□□ 0.2
SSU72-204ENST00000378726 SNRNP70P08621 437 aaKnown RBP16.31■□□□□ 0.2
SSU72-204ENST00000378726 DANCRP0C864 163 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 BSPH1Q075Z2 132 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 ZNF616Q08AN1 781 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 GUK1Q16774 197 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 SPRNQ5BIV9 151 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 ZDHHC8Q9ULC8 765 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 TRAV39A0A0B4J263 110 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 CCL21O00585 134 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 PSPNO60542 156 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 LY6DQ14210 128 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 PHLDA2Q53GA4 152 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 AWAT1Q58HT5 328 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 RTN4IP1Q8WWV3 396 aaPredicted RBP16.31■□□□□ 0.2
SSU72-204ENST00000378726 MEGF10Q96KG7 1140 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 GSN-AS1Q9NRJ2 163 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 TRAPPC2LQ9UL33 140 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 KCNIP3Q9Y2W7 256 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 ICE1Q9Y2F5 2266 aa16.31■□□□□ 0.2
SSU72-204ENST00000378726 C1QL1O75973 258 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 DAOP14920 347 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 SMIM21Q3B7S5 101 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 OR52M1Q8NGK5 317 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 C20orf24Q9BUV8 137 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 SH3BGRL3Q9H299 93 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 MED19A0JLT2 244 aaPredicted RBP16.3■□□□□ 0.2
SSU72-204ENST00000378726 C7orf77A4D0Y5 90 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 C1orf196B1AJZ1 125 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 HLA-DRB3P79483 266 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 HMGN3Q15651 99 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 GAPTQ8N292 157 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 ISOC2Q96AB3 205 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 C18orf12Q96KH6 178 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 GINS3Q9BRX5 216 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 RSRP1Q9BUV0 290 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 SLC2A9Q9NRM0 540 aa16.3■□□□□ 0.2
SSU72-204ENST00000378726 TRAV20A0A0B4J274 112 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 C5orf52A6NGY3 159 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 GPR137BO60478 399 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 TFF1P04155 84 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 SEC11BP0C7V7 166 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 RBMS3Q6XE24 437 aaKnown RBP16.29■□□□□ 0.2
SSU72-204ENST00000378726 SLC16A13Q7RTY0 426 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 PRR7Q8TB68 274 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 ITLN1Q8WWA0 313 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 GALNT14Q96FL9 552 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 PLCE1Q9P212 2302 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 A0A1W2PPE3 182 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 UBE2CO00762 179 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 SFTPCP11686 197 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 P2RY1P47900 373 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 CAMLGP49069 296 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 MOGAT3Q86VF5 341 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 OR11L1Q8NGX0 322 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 EIF5A2Q9GZV4 153 aaKnown RBP16.29■□□□□ 0.2
SSU72-204ENST00000378726 C19orf12Q9NSK7 152 aa16.29■□□□□ 0.2
SSU72-204ENST00000378726 BORCS7-ASMTA0A0B4J1R7 106 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 SRRM5B3KS81 715 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 IFNL4K9M1U5 179 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 M0R036 132 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 TUSC2O75896 110 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 S100A6P06703 90 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 GNRHRP30968 328 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 CFHR2P36980 270 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 ASCL1P50553 236 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 NHLH2Q02577 135 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 LIAT1Q6ZQX7 453 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 MOB1BQ7L9L4 216 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 OR10J5Q8NHC4 309 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 IL1F10Q8WWZ1 152 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 NGBQ9NPG2 151 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 WIPI2Q9Y4P8 454 aa16.28■□□□□ 0.2
SSU72-204ENST00000378726 A0A1W2PPH5 198 aa16.27■□□□□ 0.2
SSU72-204ENST00000378726 EGR1P18146 543 aa16.27■□□□□ 0.2
SSU72-204ENST00000378726 PRR18Q8N4B5 295 aa16.27■□□□□ 0.2
SSU72-204ENST00000378726 COMMD1Q8N668 190 aa16.27■□□□□ 0.2
SSU72-204ENST00000378726 MSI2Q96DH6 328 aaKnown RBP16.27■□□□□ 0.2
SSU72-204ENST00000378726 TCEAL7Q9BRU2 100 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms