RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 NKX2-6A6NCS4 301 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 J3QW42 95 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 MGST3O14880 152 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 RPL31P62899 125 aaKnown RBP12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 PSG7Q13046 419 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 SPINK9Q5DT21 86 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 LDLRAD3Q86YD5 345 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 OR5P3Q8WZ94 311 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 GFI1Q99684 422 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
SHROOM1-203ENST00000378679 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 ST8SIA5O15466 376 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 TMEM267Q0VDI3 215 aaPredicted RBP12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 SSX8Q7RTT4 187 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 MDS2Q8NDY4 140 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 POM121Q96HA1 1249 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 NMES1Q9C002 83 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 KIAA1456Q9P272 454 aa12.15□□□□□ -0.47
SHROOM1-203ENST00000378679 PPIAL4EA0A075B759 164 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 PPIAL4DF5H284 164 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 CHST1O43916 411 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 OPN1MWP04001 364 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 PPIAL4FP0DN26 164 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 OVCH2Q7RTZ1 564 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 NABP1Q96AH0 204 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 RPEQ96AT9 228 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 LYZL4Q96KX0 146 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 RAXQ9Y2V3 346 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 PPIAL4AQ9Y536 164 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 IGF2RP11717 2491 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 SMPD2O60906 423 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 AWAT1Q58HT5 328 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 A0A1W2PPE3 182 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 RHBDL1O75783 438 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 YIF1AO95070 293 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 CLDN14O95500 239 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 MDKP21741 143 aaPredicted RBP12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 GLRXP35754 106 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 RNF212Q495C1 297 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 WBP1Q96G27 269 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 SOSTQ9BQB4 213 aa12.14□□□□□ -0.47
SHROOM1-203ENST00000378679 HBZP02008 142 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 ADH4P08319 380 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 F2RP25116 425 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 MPV17P39210 176 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 SLC25A28Q96A46 364 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 SYNGR2O43760 224 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 CD74P04233 296 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 BTCP35070 178 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 PSMB3P49720 205 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 KLRB1Q12918 225 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 NUDT16L1Q9BRJ7 211 aaKnown RBP12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 IL36GQ9NZH8 169 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 ABCA1O95477 2261 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 CDS2O95674 445 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 GYPAP02724 150 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 GUK1Q16774 197 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 OR52L2PQ8NGH6 319 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 MEGF10Q96KG7 1140 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 SERTAD4Q9NUC0 356 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
SHROOM1-203ENST00000378679 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 WNT9BO14905 357 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 C1QL1O75973 258 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 MELTFP08582 738 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 PSG2P11465 335 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 FOXF2Q12947 444 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 IL24Q13007 206 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 CACFD1Q9UGQ2 172 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 EYSQ5T1H1 3165 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 PLCE1Q9P212 2302 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 C5orf63A6NC05 138 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms