RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF256Q9Y2P7 627 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-204ENST00000376643 U3KQK5 164 aa11.54□□□□□ -0.56
HDAC6-204ENST00000376643 UBE2QL1A1L167 161 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 ZNF736B4DX44 427 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-204ENST00000376643 SLC2A2P11168 524 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-204ENST00000376643 CD40LGP29965 261 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 VHLP40337 213 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 LUMP51884 338 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-204ENST00000376643 ZNF616Q08AN1 781 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 FAM27D1Q5T7N8 215 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 PYHIN1Q6K0P9 492 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 LIN54Q6MZP7 749 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 ZNF429Q86V71 674 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 PHYHIPQ92561 330 aa11.53□□□□□ -0.56
HDAC6-204ENST00000376643 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-204ENST00000376643 TRAV41A0A0B4J266 112 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 PNMA8CA0A1B0GUJ8 204 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 A0A1W2PPK0 400 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 RAB29O14966 203 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 ARPC1BO15143 372 aaKnown RBP11.52□□□□□ -0.57
HDAC6-204ENST00000376643 RBBP9O75884 186 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 BPNT1O95861 308 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 MC5RP33032 325 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 TMEM267Q0VDI3 215 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-204ENST00000376643 C5orf64Q2M2E5 130 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 NKAPLQ5M9Q1 402 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 ZNF833PQ6ZTB9 187 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 NPBQ8NG41 125 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 OR1N2Q8NGR9 330 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 KCNG3Q8TAE7 436 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 MRPL30Q8TCC3 161 aaKnown RBP11.52□□□□□ -0.57
HDAC6-204ENST00000376643 NABP2Q9BQ15 211 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 MND1Q9BWT6 205 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 TMEM59Q9BXS4 323 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 PARP11Q9NR21 331 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 PLCXD1Q9NUJ7 323 aa11.52□□□□□ -0.57
HDAC6-204ENST00000376643 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
HDAC6-204ENST00000376643 OR5H14A6NHG9 310 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 ATP6V0E1O15342 81 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 CHATP28329 748 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 PPIFP30405 207 aaKnown RBP11.51□□□□□ -0.57
HDAC6-204ENST00000376643 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
HDAC6-204ENST00000376643 ADARB1P78563 741 aaKnown RBP11.51□□□□□ -0.57
HDAC6-204ENST00000376643 HMGN3Q15651 99 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 LRRC36Q1X8D7 754 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 ZNF660Q6AZW8 331 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-204ENST00000376643 AHSA2Q719I0 299 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 OR52L2PQ8NGH6 319 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 FAM46BQ96A09 425 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 RNF5Q99942 180 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
HDAC6-204ENST00000376643 CHMP1AQ9HD42 196 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-204ENST00000376643 PSORS1C1Q9UIG5 152 aa11.51□□□□□ -0.57
HDAC6-204ENST00000376643 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 ITGB1BP1O14713 200 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 NDUFA3O95167 84 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 LY86O95711 162 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 SAA2P0DJI9 122 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-204ENST00000376643 RAB9AP51151 201 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 RPS27AP62979 156 aaKnown RBP11.5□□□□□ -0.57
HDAC6-204ENST00000376643 PLGLAQ15195 96 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 C6orf141Q5SZD1 244 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 RNLSQ5VYX0 342 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 SIGIRRQ6IA17 410 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 FAM53AQ6NSI3 398 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-204ENST00000376643 NANOGP1Q8N7R0 232 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 IL1F10Q8WWZ1 152 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 PRR25Q96S07 402 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 URM1Q9BTM9 101 aaKnown RBP11.5□□□□□ -0.57
HDAC6-204ENST00000376643 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 SLC23A1Q9UHI7 598 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-204ENST00000376643 SMAD5-AS1Q9Y6J3 95 aa11.5□□□□□ -0.57
HDAC6-204ENST00000376643 IGHV7-81A0A0B4J1V7 117 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 I3L521 148 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 GSTP1P09211 210 aaKnown RBP11.49□□□□□ -0.57
HDAC6-204ENST00000376643 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-204ENST00000376643 GABPB1Q06547 395 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-204ENST00000376643 GNMTQ14749 295 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 ACSM3Q53FZ2 586 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 RBM48Q5RL73 367 aaKnown RBP11.49□□□□□ -0.57
HDAC6-204ENST00000376643 ODF3L1Q8IXM7 274 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 MINDY2Q8NBR6 621 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 BPIFB6Q8NFQ5 453 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 OR6M1Q8NGM8 313 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 TM2D1Q9BX74 207 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 PLEKHJ1Q9NW61 149 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 SCOCQ9UIL1 159 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
HDAC6-204ENST00000376643 C3orf84H3BNL1 204 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 OVOL1O14753 267 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 ZBTB25P24278 435 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 HTR2CP28335 458 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms