RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	C7orf69	Q9H7B7	122 aa		11.37	□□□□□ -0.59
DDR1-225	ENST00000376568	CBLN4	Q9NTU7	201 aa		11.37	□□□□□ -0.59
DDR1-225	ENST00000376568	IL19	Q9UHD0	177 aa		11.37	□□□□□ -0.59
DDR1-225	ENST00000376568	RPH3AL	Q9UNE2	315 aa		11.37	□□□□□ -0.59
DDR1-225	ENST00000376568	SELENOK	Q9Y6D0	94 aa		11.37	□□□□□ -0.59
DDR1-225	ENST00000376568	CLEC18B	Q6UXF7	455 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	CDH26	Q8IXH8	852 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	LINC00527	Q9UJ94	153 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	TRAV24	A0A0B4J272	114 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	TOX4	O94842	621 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	IGFBP3	P17936	291 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	TMEM128	Q5BJH2	165 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	NCMAP	Q5T1S8	102 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568		Q6ZNX1	250 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	ARRDC1	Q8N5I2	433 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	ACY3	Q96HD9	319 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	RASL12	Q9NYN1	266 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	KIAA1456	Q9P272	454 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	RNF223	E7ERA6	249 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	TNXA	Q16473	311 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	DCAF12L2	Q5VW00	463 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	NOXA1	Q86UR1	476 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	ABHD12	Q8N2K0	398 aa		11.36	□□□□□ -0.59
DDR1-225	ENST00000376568	C3orf85	A0A1B0GTC6	90 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	PRAF2	O60831	178 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	OTX1	P32242	354 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	IL24	Q13007	206 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	RTL8B	Q17RB0	113 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	NRN1L	Q496H8	165 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	STX12	Q86Y82	276 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	SLC7A5P1	Q8MH63	180 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	DLL4	Q9NR61	685 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	TESK1	Q15569	626 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	ERGIC1	Q969X5	290 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	TMUB1	Q9BVT8	246 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	SSX5	O60225	188 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	CGA	P01215	116 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	WDR86	Q86TI4	376 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	SNX22	Q96L94	193 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	SDHC	Q99643	169 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	TREM1	Q9NP99	234 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	TACC2	O95359	2948 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	LOC390937	A0A1W2PQ73	354 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	RNF212B	A8MTL3	300 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	RP2	O75695	350 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	OR2F1	Q13607	317 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	KLF9	Q13886	244 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	LYG2	Q86SG7	212 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	MARVELD3	Q96A59	401 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	HARBI1	Q96MB7	349 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	OR5B12	Q96R08	314 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	BARX1	Q9HBU1	254 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	PLSCR2	Q9NRY7	297 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	C19orf12	Q9NSK7	152 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	OR2W1	Q9Y3N9	320 aa		11.35	□□□□□ -0.59
DDR1-225	ENST00000376568	SH2D7	A6NKC9	451 aa	Predicted RBP	11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	F2RL2	O00254	374 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	PET100	P0DJ07	73 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	PGA5	P0DJD9	388 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	RPL23A	P62750	156 aa	Known RBP	11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	RAB32	Q13637	225 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	FAM74A1	Q5RGS3	127 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	PIMREG	Q9BSJ6	248 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	PKIB	Q9C010	78 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	MFNG	O00587	321 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	REG1A	P05451	166 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	METTL15P1	P0C7V9	234 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	ECSCR	Q19T08	205 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	GGNBP1	Q5YKI7	109 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	IL17REL	Q6ZVW7	336 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	HOGA1	Q86XE5	327 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	CD177	Q8N6Q3	437 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	VSIG10L2	P0DP72	767 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	PRB4	P10163	310 aa	Predicted RBP	11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	SLC6A1	P30531	599 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	PDLIM4	P50479	330 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	BAX	Q07812	192 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	BVES	Q8NE79	360 aa		11.34	□□□□□ -0.59
DDR1-225	ENST00000376568	C9orf170	A2RU37	121 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	PCP4L1	A6NKN8	68 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ST8SIA3	O43173	380 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	P2RX3	P56373	397 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	HCP5	Q6MZN7	132 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ZNF843	Q8N446	348 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	LRRC20	Q8TCA0	184 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	RPS4Y2	Q8TD47	263 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	NEIL1	Q96FI4	390 aa	Predicted RBP	11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ZNF75A	Q96N20	296 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	IGHV3OR16-8	A0A075B7F1	116 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	SLC25A17	O43808	307 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	MDH2	P40926	338 aa	Known RBP	11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	FAM209A	Q5JX71	171 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	C20orf204	Q6ZNR8	217 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	MISP3	Q96FF7	219 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ABHD14A	Q9BUJ0	271 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	HRH4	Q9H3N8	390 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 114 ms