RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 Q8N9W7 124 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 RAB9BQ9NP90 201 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 PLSCR3Q9NRY6 295 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 KCNIP1Q9NZI2 227 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 TRDV1A0A1B0GX56 115 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 YPEL1O60688 119 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 OR3A3P47888 321 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 HTD2P86397 168 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 LSAMPQ13449 338 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 C22orf42Q6IC83 251 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 CENPVQ7Z7K6 275 aaPredicted RBP12.32□□□□□ -0.44
SDHB-201ENST00000375499 ZNF329Q86UD4 541 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 SETD6Q8TBK2 473 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 IL1F10Q8WWZ1 152 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
SDHB-201ENST00000375499 PECRQ9BY49 303 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 MRPL20Q9BYC9 149 aaKnown RBP12.32□□□□□ -0.44
SDHB-201ENST00000375499 IFI27L2Q9H2X8 130 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 STEAP1Q9UHE8 339 aa12.32□□□□□ -0.44
SDHB-201ENST00000375499 SAA2-SAA4A0A096LPE2 208 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 TRAV1-2A0A0B4J238 106 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 ST8SIA5O15466 376 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 LANCL1O43813 399 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 MRPS14O60783 128 aaKnown RBP12.31□□□□□ -0.44
SDHB-201ENST00000375499 SAA2P0DJI9 122 aaPredicted RBP12.31□□□□□ -0.44
SDHB-201ENST00000375499 PSMB9P28065 219 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 CD1BP29016 333 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 F2RL1P55085 397 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 SAMD5Q5TGI4 173 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 OR2T10Q8NGZ9 312 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 GALMQ96C23 342 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 CHMP1AQ9HD42 196 aaPredicted RBP12.31□□□□□ -0.44
SDHB-201ENST00000375499 OR1A1Q9P1Q5 309 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 KCNK7Q9Y2U2 307 aa12.31□□□□□ -0.44
SDHB-201ENST00000375499 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 NCBP2LA6PVI3 153 aaKnown RBP12.3□□□□□ -0.44
SDHB-201ENST00000375499 TXNL1O43396 289 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 MOSP00540 346 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 IGHG2P01859 326 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 STEAP3Q658P3 488 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 ZNF833PQ6ZTB9 187 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 RITA1Q96K30 269 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 NABP2Q9BQ15 211 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 HSPB9Q9BQS6 159 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 ZNF251Q9BRH9 671 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 HSF4Q9ULV5 492 aa12.3□□□□□ -0.44
SDHB-201ENST00000375499 IGKV1-6A0A0C4DH72 117 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 TCRBV4S1A1TA0A5B7 111 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 PSMB11A5LHX3 300 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 SCTP09683 121 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 SLC2A2P11168 524 aaPredicted RBP12.29□□□□□ -0.44
SDHB-201ENST00000375499 MYL9P24844 172 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 CNTFRP26992 372 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 LY6G6FQ5SQ64 297 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 MOB1BQ7L9L4 216 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 OR4X2Q8NGF9 303 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 S1PR3Q99500 378 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 ABCG5Q9H222 651 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 Q9H521 79 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 Q9N2K0 584 aa12.29□□□□□ -0.44
SDHB-201ENST00000375499 TXNL4BQ9NX01 149 aaKnown RBP12.29□□□□□ -0.44
SDHB-201ENST00000375499 RRP15Q9Y3B9 282 aaKnown RBP12.29□□□□□ -0.44
SDHB-201ENST00000375499 SERPINE3A8MV23 424 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 RAB27BO00194 218 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 RAB3BP20337 219 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 GPR12P47775 334 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 RPL39P5Q59GN2 51 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 KHDC1LQ5JSQ8 128 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 ZNF773Q6PK81 442 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 STPG2Q8N412 459 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 OR2AK2Q8NG84 335 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 OR4F17Q8NGA8 305 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 OR56B1Q8NGI3 324 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 ABHD14BQ96IU4 210 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 OR4F4Q96R69 305 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
SDHB-201ENST00000375499 RNF167Q9H6Y7 350 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
SDHB-201ENST00000375499 ABRACLQ9P1F3 81 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 LRRC42Q9Y546 428 aa12.28□□□□□ -0.44
SDHB-201ENST00000375499 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
SDHB-201ENST00000375499 PDCD5O14737 125 aa12.27□□□□□ -0.45
SDHB-201ENST00000375499 RGS11O94810 467 aa12.27□□□□□ -0.45
SDHB-201ENST00000375499 PRB2P02812 416 aaPredicted RBP12.27□□□□□ -0.45
SDHB-201ENST00000375499 GALP22466 123 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms