RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TMEM108Q6UXF1 575 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 YRDCQ86U90 279 aaKnown RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 GATAD1Q8WUU5 269 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 GUCD1Q96NT3 240 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 P2RY4P51582 365 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 KLF3P57682 345 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 CST9Q5W186 159 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 DLK2Q6UY11 383 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TRBV24-1A0A075B6N3 115 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 GCSAMQ8N6F7 178 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 SCNM1Q9BWG6 230 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TM2D1Q9BX74 207 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 A0A1W2PPV9 198 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 DPRXA6NFQ7 191 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 ANKRD37Q7Z713 158 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 NDUFS6O75380 124 aaKnown RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TRGC1P0CF51 173 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 DLX1P56177 255 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TRMT61AQ96FX7 289 aaKnown RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 OR2H1Q9GZK4 316 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 MRPS18BQ9Y676 258 aaKnown RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 S1PR2O95136 353 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TYMSP04818 313 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 CCDC144NLQ6NUI1 221 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 MYEOVQ96EZ4 313 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 MAP1BP46821 2468 aaKnown RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TRBV6-7A0A0A0MS04 114 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 ACSF3Q4G176 576 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 GPR35Q9HC97 309 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 PSG11Q9UQ72 335 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 METTL12A8MUP2 240 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TMEM14DPA8MWL7 114 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 C21orf140B9A014 251 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 C9orf135Q5VTT2 229 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 PDCD11Q14690 1871 aaKnown RBP8.87□□□□□ -0.99
PTCH1-204ENST00000375290 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-204ENST00000375290 PTGDSP41222 190 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 PSMB2P49721 201 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 PSG9Q00887 426 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 OR10D3Q8NH80 312 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 RND1Q92730 232 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 FLYWCH2Q96CP2 140 aaKnown RBP8.87□□□□□ -0.99
PTCH1-204ENST00000375290 MFAP2P55001 183 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 GBGT1Q8N5D6 347 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 Q8WTZ3 238 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 RECKO95980 971 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 CDAP32320 146 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 SRSF5Q13243 272 aaKnown RBP8.87□□□□□ -0.99
PTCH1-204ENST00000375290 NIT1Q86X76 327 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 GNB4Q9HAV0 340 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 TRAV34A0A0B4J273 112 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 HBBP68871 147 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 SMAD2Q15796 467 aaKnown RBP8.87□□□□□ -0.99
PTCH1-204ENST00000375290 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 OR10S1Q8NGN2 331 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 A0A1B0GV90 55 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 K7ESF4 209 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 NDUFA2O43678 99 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 EML2O95834 649 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 KCNMB2Q9Y691 235 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 C17orf51A8MQB3 221 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 AESQ08117 197 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 OR10J3Q5JRS4 329 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 WDYHV1Q96HA8 205 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 KCNS1Q96KK3 526 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 TNFSF15O95150 251 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 MRPL37Q9BZE1 423 aaKnown RBP8.87□□□□□ -0.99
PTCH1-204ENST00000375290 PLXNA1Q9UIW2 1896 aa8.87□□□□□ -0.99
PTCH1-204ENST00000375290 TSPAN7P41732 249 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 MRPS11P82912 194 aaKnown RBP8.86□□□□□ -0.99
PTCH1-204ENST00000375290 Q56UQ5 140 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 ACSM6Q6P461 480 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 CTHRC1Q96CG8 243 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 Q96M66 194 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 COA4Q9NYJ1 87 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 TTC32Q5I0X7 151 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 PHF7Q9BWX1 381 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-204ENST00000375290 MRGPRFQ96AM1 343 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 FAM131CQ96AQ9 280 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 C12orf49Q9H741 205 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 TMEM196Q5HYL7 178 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 LAIR2Q6ISS4 152 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 KIR3DL2P43630 455 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 CEBPDP49716 269 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-204ENST00000375290 C2orf68Q2NKX9 166 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF880Q6PDB4 577 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 LYG1Q8N1E2 194 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-204ENST00000375290 CD160O95971 181 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 CBLN3Q6UW01 205 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 PAXXQ9BUH6 204 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 RAB1BQ9H0U4 201 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 PARLQ9H300 379 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 C6orf106Q9H6K1 298 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms