RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 EWSR1Q01844 656 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 MEF2CQ06413 473 aaPredicted RBP7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 BTNL8Q6UX41 500 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 RELL2Q8NC24 303 aaPredicted RBP7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 OR51H1Q8NH63 302 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 RNASE11Q8TAA1 199 aaKnown RBP7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 LHFPL5Q8TAF8 219 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 PLPPR1Q8TBJ4 325 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 TMEM171Q8WVE6 324 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 CORO2AQ92828 525 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 ABHD17AQ96GS6 310 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 MEGF10Q96KG7 1140 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 ATP5SQ99766 215 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 GGACTQ9BVM4 153 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 MRPL37Q9BZE1 423 aaKnown RBP7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 OR2S2Q9NQN1 319 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 CRIM1Q9NZV1 1036 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 RCL1Q9Y2P8 373 aaKnown RBP7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 PRELID3BQ9Y3B1 194 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 RNF115Q9Y4L5 304 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 TIMM9Q9Y5J7 89 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 KPTNQ9Y664 436 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 FREM1Q5H8C1 2179 aa7.32□□□□□ -1.24
SNRNP40-202ENST00000373720 IGKV1D-13A0A0B4J2D9 117 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 A0A1W2PR80 420 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF729A6NN14 1252 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 C12orf77C9JDV5 145 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 M0R1B8 84 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 TXNL1O43396 289 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 FBXO24O75426 580 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 TSPAN9O75954 239 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 AGFG2O95081 481 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 HPRT1P00492 218 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 HBZP02008 142 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 CD5P06127 495 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 IGKV1-13P0DP09 117 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 PSG2P11465 335 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 CD40P25942 277 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 PAX6P26367 422 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 OR3A1P47881 315 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 AKR1C2P52895 323 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 COL10A1Q03692 680 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 PDCD1Q15116 288 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 FBXL19-AS1Q494R0 122 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 PDLIM3Q53GG5 364 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 TEX36Q5VZQ5 186 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 Q6ZR03 302 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 MYPOPQ86VE0 399 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 DOLPP1Q86YN1 238 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 FGFRL1Q8N441 504 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 DRAM1Q8N682 238 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 C8orf31Q8N9H6 132 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 OR2Z1Q8NG97 314 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 LRRC29Q8WV35 223 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 C14orf79Q96F83 325 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 CCDC120Q96HB5 630 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF488Q96MN9 340 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF251Q9BRH9 671 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 OR51B6Q9H340 312 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 MS4A5Q9H3V2 200 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 ESRP2Q9H6T0 727 aaKnown RBP7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 UQCC1Q9NVA1 299 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 ASF1BQ9NVP2 202 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF581Q9P0T4 197 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 HSPB7Q9UBY9 170 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 OR14J1Q9UGF5 321 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
SNRNP40-202ENST00000373720 DOCK7Q96N67 2140 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 TRGV10A0A0A0MS01 117 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 TRAV38-1A0A0B4J264 116 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 ODAMA1E959 279 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 RNASEK-C17orf49H0YIS7 233 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 HSPB6O14558 160 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 CHST1O43916 411 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 PSPNO60542 156 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 MPDU1O75352 247 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 IGLV2-14P01704 120 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 OR8U9P0C7N5 309 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF83P51522 516 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 ERVS71-1P61550 626 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 SRSF6Q13247 344 aaKnown RBP7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 EIF4EBP1Q13541 118 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 TBR1Q16650 682 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 DHRS7BQ6IAN0 325 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 FAM71F2Q6NXP2 309 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 GFRALQ6UXV0 394 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 CENPVQ7Z7K6 275 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 SPACA3Q8IXA5 215 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 OR10G4Q8NGN3 311 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 OR8U1Q8NH10 309 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 SCGB1C1Q8TD33 95 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 RND1Q92730 232 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 OR2V2Q96R30 315 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 CLCC1Q96S66 551 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF665Q9H7R5 613 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 TUBA4BQ9H853 241 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms