RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 KIR2DS1A0A191URI9 304 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 IGKV1-39P01597 117 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 IGKV1D-39P04432 117 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 OTX2P32243 289 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 MEF2BQ02080 365 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 KIR2DS1Q14954 304 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 SLC10A1Q14973 349 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 PMS2CLQ68D20 193 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 OR8G2PQ6IF36 304 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 RPP25LQ8N5L8 163 aaKnown RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 OR2Y1Q8NGV0 311 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 NOL4LQ96MY1 436 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 NEU1Q99519 415 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 SH2D2AQ9NP31 389 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 KIAA1549Q9HCM3 1950 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 PDGFBP01127 241 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 NUBP1P53384 320 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 RAC3P60763 192 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 SLC25A22Q9H936 323 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 PPP1R3CQ9UQK1 317 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 CD300LBA8K4G0 201 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 B3GALT5-AS1P59052 145 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 NUTF2P61970 127 aaKnown RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 PRDX4Q13162 271 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 TMEM41BQ5BJD5 291 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 CYP2G1PQ6ZSU1 146 aa12.59□□□□□ -0.39
COL9A2-202ENST00000372748 MRPL37Q9BZE1 423 aaKnown RBP12.59□□□□□ -0.39
COL9A2-202ENST00000372748 FREM1Q5H8C1 2179 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 SYNGR1O43759 233 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 IFNA1P01562 189 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 P04436 131 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 FOLR3P41439 243 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 FGF12P61328 243 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 Q6ZS49 121 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 ZDHHC23Q8IYP9 409 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 OR10J5Q8NHC4 309 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 CPT1CQ8TCG5 803 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 IL22RA2Q969J5 263 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 ZNF845Q96IR2 970 aaPredicted RBP12.58□□□□□ -0.4
COL9A2-202ENST00000372748 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 SOX15O60248 233 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 DEFA4P12838 97 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 CLDN15P56746 228 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 TRIM61Q5EBN2 209 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 GGNQ86UU5 652 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.4
COL9A2-202ENST00000372748 PYGO2Q9BRQ0 406 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
COL9A2-202ENST00000372748 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
COL9A2-202ENST00000372748 PARLQ9H300 379 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 CBLN4Q9NTU7 201 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 OR2W1Q9Y3N9 320 aa12.58□□□□□ -0.4
COL9A2-202ENST00000372748 FAM186AA6NE01 2351 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 KBTBD11O94819 623 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 IGKV1-5P01602 117 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
COL9A2-202ENST00000372748 PAX5Q02548 391 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 KRTAP27-1Q3LI81 207 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-202ENST00000372748 OR4F5Q8NH21 305 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 OR10D3Q8NH80 312 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 ABHD3Q8WU67 409 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 ADGRG7Q96K78 797 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 OR4F4Q96R69 305 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 AURKAIP1Q9NWT8 199 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-202ENST00000372748 ZNF391Q9UJN7 358 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 A0A096LPE4 126 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 A0A1W2PPZ6 126 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 S100GP29377 79 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 HBG1P69891 147 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 HBG2P69892 147 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 SERF2P84101 59 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 Q0VFX4 171 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
COL9A2-202ENST00000372748 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 ZNF324BQ6AW86 544 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-202ENST00000372748 SNHG12Q9BXW3 62 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
COL9A2-202ENST00000372748 A0A1B0GUS0 222 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 GJE1A6NN92 205 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 TRAPPC2LH3BP13 241 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 GCGP01275 180 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 BMP5P22003 454 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 CEACAM6P40199 344 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 LRP11Q86VZ4 500 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 OR10V1Q8NGI7 309 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 TAF15Q92804 592 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL9A2-202ENST00000372748 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
COL9A2-202ENST00000372748 RBM7Q9Y580 266 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms