RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 OR10J6PQ8NGY7 276 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 RPS4Y2Q8TD47 263 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 MYOZ3Q8TDC0 251 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 ADAT3Q96EY9 351 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 GSX2Q9BZM3 304 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 MAP1LC3B2A6NCE7 125 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 RANP62826 216 aaKnown RBP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 RAB32Q13637 225 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 IZUMO4Q1ZYL8 232 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 TMEM18Q96B42 140 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 SNRNP40Q96DI7 357 aaKnown RBP8.5□□□□□ -1.05
COL4A6-202ENST00000372216 MAP1LC3BQ9GZQ8 125 aa8.5□□□□□ -1.05
COL4A6-202ENST00000372216 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
COL4A6-202ENST00000372216 CTSDP07339 412 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-202ENST00000372216 HIST1H1EP10412 219 aaKnown RBP8.49□□□□□ -1.05
COL4A6-202ENST00000372216 FAM27BQ5VT28 67 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 SRXN1Q9BYN0 137 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 SIPA1L1O43166 1804 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 CHST1O43916 411 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 PPP1R17O96001 155 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 MS4A3Q96HJ5 214 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 PIPOXQ9P0Z9 390 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 H3BTX0 84 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 FAM106CPP0CH98 169 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 RPL31P62899 125 aaKnown RBP8.49□□□□□ -1.05
COL4A6-202ENST00000372216 FAM53AQ6NSI3 398 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-202ENST00000372216 LRRC75AQ8NAA5 344 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 FAM216AQ8WUB2 273 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 GPA33Q99795 319 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 CCL28Q9NRJ3 127 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 ADRB1P08588 477 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 CLDN18P56856 261 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 B2MP61769 119 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 TLNRD1Q9H1K6 362 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 OR4C45A6NMZ5 311 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 DHRS7CA6NNS2 312 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 FAM162BQ5T6X4 162 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 FDCSPQ8NFU4 85 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF714Q96N38 554 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 PRSS27Q9BQR3 290 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 KLK15Q9H2R5 256 aa8.49□□□□□ -1.05
COL4A6-202ENST00000372216 ARID2Q68CP9 1835 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 IL13RA2Q14627 380 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 NEU1Q99519 415 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-202ENST00000372216 CEACAM1P13688 526 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 POM121Q96HA1 1249 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF883P0CG24 379 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 TEX30Q5JUR7 227 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 GBGT1Q8N5D6 347 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 ITLN1Q8WWA0 313 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 SGK494Q96LW2 274 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 MMP24Q9Y5R2 645 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 SRSF10O75494 262 aaKnown RBP8.48□□□□□ -1.05
COL4A6-202ENST00000372216 IGHV3-48P01763 117 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 FAM157CP0CG43 387 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 DAOP14920 347 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 CEACAM21Q3KPI0 293 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 NUDT16L1Q9BRJ7 211 aaKnown RBP8.48□□□□□ -1.05
COL4A6-202ENST00000372216 HIGD1AQ9Y241 93 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 TRAV8-7A0A075B6U6 113 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 J3QR89 54 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 DEDDO75618 318 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 HPXP02790 462 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 FUT5Q11128 374 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 CCDC144NLQ6NUI1 221 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF826PQ6ZT77 177 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 MRGPRFQ96AM1 343 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 HDHD3Q9BSH5 251 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-202ENST00000372216 SFXN3Q9BWM7 321 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 SCN3AQ9NY46 2000 aa8.48□□□□□ -1.05
COL4A6-202ENST00000372216 RGS13O14921 159 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 PRSS23O95084 383 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 PSG2P11465 335 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 NMUP48645 174 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 PPP1R32Q7Z5V6 425 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 SGMS2Q8NHU3 365 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 TRPM7Q96QT4 1865 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 MFSD2BA6NFX1 497 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 FBLL1A6NHQ2 334 aaKnown RBP8.47□□□□□ -1.05
COL4A6-202ENST00000372216 SMIM10L1P0DMW3 83 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 RPS4Y1P22090 263 aaKnown RBP8.47□□□□□ -1.05
COL4A6-202ENST00000372216 RBM11P57052 281 aaKnown RBP8.47□□□□□ -1.05
COL4A6-202ENST00000372216 MGAT2Q10469 447 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 SMIM10Q96HG1 83 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 RAX2Q96IS3 184 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 PSME4Q14997 1843 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 GREB1LQ9C091 1923 aaPredicted RBP8.47□□□□□ -1.05
COL4A6-202ENST00000372216 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 GDF9O60383 454 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 PPYP01298 95 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 MOGAT2Q3SYC2 334 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 LDLRAD3Q86YD5 345 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 RAB37Q96AX2 223 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 OR2W1Q9Y3N9 320 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 RNF115Q9Y4L5 304 aa8.47□□□□□ -1.05
COL4A6-202ENST00000372216 SCN10AQ9Y5Y9 1956 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms