RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SCARF2Q96GP6 870 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 SLC25A22Q9H936 323 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 FGF8P55075 233 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM105Q8N8V8 129 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 PARP11Q9NR21 331 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 JKAMPQ9P055 326 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 PLPPR5Q32ZL2 321 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 FAM71F2Q6NXP2 309 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 PLPPR2Q96GM1 343 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 ANGPTL4Q9BY76 406 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRF1P14222 555 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 CEACAM3P40198 252 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 FRRS1LQ9P0K9 344 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 HRASP01112 189 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 SOD3P08294 240 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 FGF2P09038 288 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 SMIM13P0DJ93 91 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 CEACAM1P13688 526 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR8B12Q8NGG6 310 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM56Q96MV1 263 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 GHITMQ9H3K2 345 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 MS4A5Q9H3V2 200 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 KCNK15Q9H427 330 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 GSN-AS1Q9NRJ2 163 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM38BQ9NVV0 291 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 DEFB108AA8MXU0 73 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 AHRRA9YTQ3 701 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRSS1P07477 247 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 MS4A7Q9GZW8 240 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 PTP4A3O75365 173 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 WISP3O95389 354 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 HLA-GP17693 338 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 NUBP1P53384 320 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 LDLRAD2Q5SZI1 272 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 LYG1Q8N1E2 194 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR2T6Q8NHC8 308 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 PCGF1Q9BSM1 259 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 NGFRP08138 427 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 LINC00614P0C842 121 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 IFITM3Q01628 133 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 PMCHL1Q16048 86 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR4D11Q8NGI4 311 aa11.62□□□□□ -0.55
RAPGEF1-201ENST00000372189 LRRC3CA6NJW4 275 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRR33A8MZF0 331 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 ADRA2AP08913 450 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 MRPS18AQ9NVS2 196 aaKnown RBP11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRSS50Q9UI38 385 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 ZNF729A6NN14 1252 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 EIF3GO75821 320 aaKnown RBP eCLIP11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 OVCH2Q7RTZ1 564 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 RTN4RL2Q86UN3 420 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 MOGAT3Q86VF5 341 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR10AD1Q8NGE0 317 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 PQLC2LA1A4F0 135 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 M0R3E3 92 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 SPINK4O60575 86 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM116Q8NCL8 245 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 AAMDCQ9H7C9 122 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 ELOVL5Q9NYP7 299 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 METTL1Q9UBP6 276 aaKnown RBP11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 V9GYY9 64 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 GEMIN2O14893 280 aaKnown RBP11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMPRSS2O15393 492 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 KCNAB3O43448 404 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 ATP5LO75964 103 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 IGKV1D-16P01601 117 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 HS3ST3B1Q9Y662 390 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 LDLRAD4O15165 306 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 RNF7Q9UBF6 113 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 VAX2Q9UIW0 290 aa11.61□□□□□ -0.55
RAPGEF1-201ENST00000372189 PRR19A6NJB7 356 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 FCGR3BO75015 233 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 COX6A1P12074 109 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 ANXA10Q9UJ72 324 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 IL4P05112 153 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 SLC25A34Q6PIV7 304 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 TBC1D26Q86UD7 250 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 RFESDQ8TAC1 157 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 RGP1Q92546 391 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 KNL1Q8NG31 2342 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 LOC101059948A0A1B0GTJ6 334 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 ATP1A1-AS1Q5TC04 95 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM91Q6ZNR0 172 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 MDP1Q86V88 176 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 TNFRSF19Q9NS68 423 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 ACSM6Q6P461 480 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 ANKRD29Q8N6D5 301 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 MOB3AQ96BX8 217 aa11.6□□□□□ -0.55
RAPGEF1-201ENST00000372189 SH2D2AQ9NP31 389 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms