RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 BOD1Q96IK1 185 aa9.92□□□□□ -0.82
PDE6C-201ENST00000371447 GP6Q9HCN6 339 aa9.92□□□□□ -0.82
PDE6C-201ENST00000371447 PTPRQQ9UMZ3 2332 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 KIAA1324LA8MWY0 1029 aaPredicted RBP9.91□□□□□ -0.82
PDE6C-201ENST00000371447 CDS2O95674 445 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 LYL1P12980 280 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 G6PCP35575 357 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 SULT1A2P50226 295 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 EIF4E3Q8N5X7 224 aaKnown RBP9.91□□□□□ -0.82
PDE6C-201ENST00000371447 OR4D5Q8NGN0 318 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 NINJ1Q92982 152 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDE6C-201ENST00000371447 UCP3P55916 312 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 SSTP61278 116 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 FAM27E3Q08E93 113 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 TESK1Q15569 626 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 SAXO1Q8IYX7 474 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 ZNRF1Q8ND25 227 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 S100PBPQ96BU1 408 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 SPIN2AQ99865 258 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 SPIN2BQ9BPZ2 258 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 RSG1Q9BU20 258 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 C19orf12Q9NSK7 152 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 MLXQ9UH92 298 aa9.91□□□□□ -0.82
PDE6C-201ENST00000371447 HEXAP06865 529 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 RAC2P15153 192 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 F2RL1P55085 397 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 ELLP55199 621 aaPredicted RBP9.9□□□□□ -0.82
PDE6C-201ENST00000371447 COL10A1Q03692 680 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 STARD4Q96DR4 205 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 PSG11Q9UQ72 335 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 ABCA1O95477 2261 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.9□□□□□ -0.82
PDE6C-201ENST00000371447 C12orf77C9JDV5 145 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 RD3LP0DJH9 198 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 P2RY1P47900 373 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 ZNF718Q3SXZ3 478 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 KRBOX4Q5JUW0 171 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 INO80CQ6PI98 192 aaPredicted RBP9.9□□□□□ -0.82
PDE6C-201ENST00000371447 DRAM1Q8N682 238 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 OPA3Q9H6K4 179 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 LRBAP50851 2863 aa9.9□□□□□ -0.82
PDE6C-201ENST00000371447 IGHV1-18A0A0C4DH31 117 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 PRR33A8MZF0 331 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 CLDN1O95832 211 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 CTXN2P0C2S0 81 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 KCNJ3P48549 501 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 IL13RA2Q14627 380 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 GUK1Q16774 197 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 BHLHA15Q7RTS1 189 aaPredicted RBP9.9□□□□□ -0.83
PDE6C-201ENST00000371447 H1FOOQ8IZA3 346 aaPredicted RBP9.9□□□□□ -0.83
PDE6C-201ENST00000371447 OR8G5Q8NG78 346 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 SMIM8Q96KF7 97 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 PLSCR2Q9NRY7 297 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 DKK4Q9UBT3 224 aa9.9□□□□□ -0.83
PDE6C-201ENST00000371447 HBZP02008 142 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 PGA5P0DJD9 388 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
PDE6C-201ENST00000371447 CASP6P55212 293 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 LCN15Q6UWW0 184 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 C22orf34Q6ZV56 151 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 MOGAT3Q86VF5 341 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 CISD2Q8N5K1 135 aaKnown RBP9.89□□□□□ -0.83
PDE6C-201ENST00000371447 UBAC2Q8NBM4 344 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 SNIP1Q8TAD8 396 aaKnown RBP9.89□□□□□ -0.83
PDE6C-201ENST00000371447 GALMQ96C23 342 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 PKIBQ9C010 78 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 PLEKHF2Q9H8W4 249 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 GNG12Q9UBI6 72 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 IGHV2OR16-5A0A0B4J2B6 119 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A10PA6NDY2 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A18PA6NE21 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A16PA6NEW6 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A20PA6NIJ5 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A8PA6NJQ4 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A7PA6NKC0 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A22PA8MWA6 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A12PA8MX19 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A5PA8MXJ8 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A23PA8MXZ1 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 IGKV1-39P01597 117 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 IGKV1D-39P04432 117 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A15PP0C7V4 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A13PP0C7W8 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A14PP0C7W9 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM90A24PP0C7X0 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 CBR1P16152 277 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 UCP1P25874 307 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 SRPXP78539 464 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 SEM1Q6ZVN7 128 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 VKORC1L1Q8N0U8 176 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 OR13A1Q8NGR1 328 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 RALYQ9UKM9 306 aaKnown RBP9.89□□□□□ -0.83
PDE6C-201ENST00000371447 TNFSF13O75888 250 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 ARG1P05089 322 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 RELQ04864 619 aaPredicted RBP9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FOXC1Q12948 553 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 FAM185AQ8N0U4 392 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms