RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZNF146Q15072 292 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 AGAP6Q5VW22 663 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 HACD4Q5VWC8 232 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 CD177Q8N6Q3 437 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 GPX8Q8TED1 209 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SMIM4Q8WVI0 70 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 NUDCD2Q8WVJ2 157 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DYRK2Q92630 601 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PHF21AQ96BD5 680 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 GRAMD2BQ96HH9 432 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 HDHD3Q9BSH5 251 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 CCDC32Q9BV29 185 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 NPFFR1Q9GZQ6 430 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 LIME1Q9H400 295 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SLA2Q9H6Q3 261 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 RHOFQ9HBH0 211 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ASH1LQ9NR48 2969 aaKnown RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 RCC2Q9P258 522 aaKnown RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 RNF7Q9UBF6 113 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 KLK11Q9UBX7 282 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 TBC1D24Q9ULP9 559 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PPP1R3CQ9UQK1 317 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 LAMP3Q9UQV4 416 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 RBMX2Q9Y388 322 aaKnown RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 FASNP49327 2511 aaKnown RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 PTPN13Q12923 2485 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 POLQO75417 2590 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ABCA12Q86UK0 2595 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 APCP25054 2843 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 IGKV1D-17A0A075B6S4 117 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 A0A1B0GW55 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 RFPL4AA6NLU0 287 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 RFPL4AL1F8VTS6 287 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 TMEM178BH3BS89 294 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 GABARAPH6UMI1 98 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 H7C417 338 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 M0QZ24 198 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SIRPB1O00241 398 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 TNFRSF13BO14836 293 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 MGST3O14880 152 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DEGS1O15121 323 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 NDUFA2O43678 99 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 NDUFS7O75251 213 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SCGNO76038 276 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 OR2H2O95918 312 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 HAND1O96004 215 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 FCER2P06734 321 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L2P0CJ85 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L3P0CJ86 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L4P0CJ87 422 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L5P0CJ88 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L6P0CJ89 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L7P0CJ90 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PSG2P11465 335 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 COX6B1P14854 86 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ZNF181Q2M3W8 571 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ATAD3CQ5T2N8 411 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4L9Q6RFH8 374 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 C5orf24Q7Z6I8 188 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 Q8IYB0 196 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 BPIFB2Q8N4F0 458 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 GVQW1Q8N7I0 195 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 SUMF2Q8NBJ7 301 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DEFB108BQ8NET1 73 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 OR11L1Q8NGX0 322 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 LHFPL5Q8TAF8 219 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PLPPR1Q8TBJ4 325 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 FCAMRQ8WWV6 532 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 NRGNQ92686 78 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 RDH5Q92781 318 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ZNF486Q96H40 463 aaPredicted RBP2.94□□□□□ -1.94
MCF2-202ENST00000370573 EGLN1Q9GZT9 426 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 TMEM106BQ9NUM4 274 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 PLEKHJ1Q9NW61 149 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 RASL12Q9NYN1 266 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 DUX4Q9UBX2 424 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 MTFP1Q9UDX5 166 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 AK3Q9UIJ7 227 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 ZNF222Q9UK12 451 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 WIPI2Q9Y4P8 454 aa2.94□□□□□ -1.94
MCF2-202ENST00000370573 IGKV1D-8A0A087WSZ0 117 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 IGHV1-69-2A0A0G2JMI3 117 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 A0A1W2PPQ1 181 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 OR2AT4A6NND4 320 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SULT1C2O00338 296 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 HSPB6O14558 160 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SH2D1BO14796 132 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SSX4O60224 188 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 CA11O75493 328 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 FCN3O75636 299 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 RP2O75695 350 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SPNP16150 400 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 LMO1P25800 156 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 PRDX2P32119 198 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 RFX2P48378 723 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 KRTAP10-9P60411 292 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 KLF9Q13886 244 aaPredicted RBP2.93□□□□□ -1.94
MCF2-202ENST00000370573 FAM189A2Q15884 450 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 MPV17LQ2QL34 196 aa2.93□□□□□ -1.94
MCF2-202ENST00000370573 SPIN3Q5JUX0 258 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms