RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 PPIFP30405 207 aaKnown RBP8.04□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF616Q08AN1 781 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 YIF1BQ5BJH7 314 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 ASPHD1Q5U4P2 390 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 DMKNQ6E0U4 476 aaPredicted RBP8.04□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF491Q8N8L2 437 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 MYOZ3Q8TDC0 251 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 DCUN1D4Q92564 292 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 MRPS24Q96EL2 167 aaKnown RBP8.04□□□□□ -1.12
CLRN3-201ENST00000368671 RITA1Q96K30 269 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 OR14A2Q96R54 314 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 ABHD14AQ9BUJ0 271 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 MRPL20Q9BYC9 149 aaKnown RBP8.04□□□□□ -1.12
CLRN3-201ENST00000368671 OR51J1Q9H342 316 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 S100A14Q9HCY8 104 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 ISYNA1Q9NPH2 558 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 KCNIP1Q9NZI2 227 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 ZNF580Q9UK33 172 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 DIMT1Q9UNQ2 313 aaKnown RBP8.04□□□□□ -1.12
CLRN3-201ENST00000368671 VSIG4Q9Y279 399 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 EXOSC1Q9Y3B2 195 aaKnown RBP8.04□□□□□ -1.12
CLRN3-201ENST00000368671 SMAD5-AS1Q9Y6J3 95 aa8.04□□□□□ -1.12
CLRN3-201ENST00000368671 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 IGHV7-81A0A0B4J1V7 117 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 TRAV41A0A0B4J266 112 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 OVOL1O14753 267 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 NBR2O15453 112 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 GPX5O75715 221 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 HLA-DRB1P01911 266 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 BLVRBP30043 206 aaPredicted RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 PPP1CCP36873 323 aaKnown RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 INSL3P51460 131 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 RPS11P62280 158 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 MED21Q13503 144 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 KIAA0141Q14154 515 aaPredicted RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 ECSCRQ19T08 205 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 FAM27D1Q5T7N8 215 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 OVCH2Q7RTZ1 564 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 ODF3L1Q8IXM7 274 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 GAPTQ8N292 157 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 PQLC1Q8N2U9 271 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 MRPL30Q8TCC3 161 aaKnown RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 FAM46BQ96A09 425 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 TMEM80Q96HE8 168 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 PGLYRP3Q96LB9 341 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 RDH12Q96NR8 316 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 NABP2Q9BQ15 211 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 ANKRD60Q9BZ19 345 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 ALX4Q9H161 411 aaPredicted RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 CHCHD3Q9NX63 227 aaKnown RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 SMPD3Q9NY59 655 aaPredicted RBP8.03□□□□□ -1.12
CLRN3-201ENST00000368671 KIAA1456Q9P272 454 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 JPT1Q9UK76 154 aa8.03□□□□□ -1.12
CLRN3-201ENST00000368671 TRBV5-7A0A0A0MS05 114 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 A0A1W2PN81 502 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 FAM90A10PA6NDY2 464 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 FAM90A7PA6NKC0 464 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 FAM90A23PA8MXZ1 464 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 SAP30O75446 220 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 CA11O75493 328 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 SC5DO75845 299 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 BAG2O95816 211 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 FUT3P21217 361 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 CHRNA7P36544 502 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 CAPGP40121 348 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 OR3A3P47888 321 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 RAB9AP51151 201 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 SLURP1P55000 103 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 RUNX1Q01196 453 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 GABPB1Q06547 395 aaPredicted RBP8.02□□□□□ -1.13
CLRN3-201ENST00000368671 C5orf64Q2M2E5 130 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 STEAP3Q658P3 488 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 LIN54Q6MZP7 749 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 ZNF429Q86V71 674 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 C10orf67Q8IYJ2 551 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 CASTOR1Q8WTX7 329 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 Q96M66 194 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 RCHY1Q96PM5 261 aa8.02□□□□□ -1.13
CLRN3-201ENST00000368671 MBNL3Q9NUK0 354 aaKnown RBP8.02□□□□□ -1.13
CLRN3-201ENST00000368671 SAA2-SAA4A0A096LPE2 208 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 YPEL1O60688 119 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 PDCD6O75340 191 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 RGS11O94810 467 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 GLAP06280 429 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 SAA2P0DJI9 122 aaPredicted RBP8.01□□□□□ -1.13
CLRN3-201ENST00000368671 SPNP16150 400 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 HTD2P86397 168 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 NDPQ00604 133 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 TAGLNQ01995 201 aaKnown RBP8.01□□□□□ -1.13
CLRN3-201ENST00000368671 PLGLAQ15195 96 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 ZNF833PQ6ZTB9 187 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 CDH26Q8IXH8 852 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 MUC7Q8TAX7 377 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 ABHD5Q8WTS1 349 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 CYGBQ8WWM9 190 aa8.01□□□□□ -1.13
CLRN3-201ENST00000368671 DLX4Q92988 240 aaPredicted RBP8.01□□□□□ -1.13
CLRN3-201ENST00000368671 GALMQ96C23 342 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms