RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 ARR3P36575 388 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM53AQ6NSI3 398 aaPredicted RBP12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 Q6ZRM9 215 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 WDR86Q86TI4 376 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM185AQ8N0U4 392 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 WFIKKN1Q96NZ8 548 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 PPP1R3CQ9UQK1 317 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 SEC14L6B5MCN3 397 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 HMGB3O15347 200 aaKnown RBP12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 HIST1H1BP16401 226 aaKnown RBP12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 TUBG1P23258 451 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 CEBPDP49716 269 aaPredicted RBP12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 GNG3P63215 75 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 SRPXP78539 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 TMEM267Q0VDI3 215 aaPredicted RBP12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 LRP11Q86VZ4 500 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 SAXO1Q8IYX7 474 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 OR10J5Q8NHC4 309 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 PLEKHF2Q9H8W4 249 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 SPRR3Q9UBC9 169 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 CHD3Q12873 2000 aaKnown RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 Q6ZS49 121 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 C1QL4Q86Z23 238 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 RSG1Q9BU20 258 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 GPR87Q9BY21 358 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 OR2J1Q9GZK6 312 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 UFSP2Q9NUQ7 469 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 OR5H1A6NKK0 313 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 TFF1P04155 84 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 COX5BP10606 129 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 F2RP25116 425 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 DDTP30046 118 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 PAX9P55771 341 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 ID3Q02535 119 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 SLC10A1Q14973 349 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 CXorf67Q86X51 503 aaPredicted RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 OR1K1Q8NGR3 316 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 SPIN2AQ99865 258 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 SPIN2BQ9BPZ2 258 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 ZNF665Q9H7R5 613 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 UNKLQ9H9P5 680 aaKnown RBP12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 OR2W1Q9Y3N9 320 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 ICE1Q9Y2F5 2266 aa12.84□□□□□ -0.35
SLC39A1-204ENST00000368623 BTBD17A6NE02 478 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 DEGS1O15121 323 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 PITX3O75364 302 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 ZNF266Q14584 549 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 THNSL2Q86YJ6 484 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 GPR146Q96CH1 333 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM210BQ96KR6 192 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 ATG101Q9BSB4 218 aa12.83□□□□□ -0.35
SLC39A1-204ENST00000368623 CACNA1GO43497 2377 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 CADP27708 2225 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 CEP250Q9BV73 2442 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 MGAQ8IWI9 3026 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 CDIPTO14735 213 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 LYZL6O75951 148 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 IAPPP10997 89 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 HES3Q5TGS1 186 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 ZNF295-AS1Q8N0V1 137 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 LILRB2Q8N423 598 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 GTF3AQ92664 365 aaKnown RBP12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 TVP23CQ96ET8 276 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 OR51I2Q9H344 312 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 KCNS2Q9ULS6 477 aa12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 RBM7Q9Y580 266 aaKnown RBP12.83□□□□□ -0.36
SLC39A1-204ENST00000368623 C21orf140B9A014 251 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 HSPA12AO43301 675 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 WDR1O75083 606 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 CNOT4O95628 575 aaKnown RBP12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 SERPINE2P07093 398 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 FOSL1P15407 271 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 HLA-DRB3P79483 266 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 RNPS1Q15287 305 aaKnown RBP12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 SLC25A24Q6NUK1 477 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 MDS2Q8NDY4 140 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 H0Y980 276 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 SP9P0CG40 484 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 PRSS8Q16651 343 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 AKR1C8PQ5T2L2 129 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 FBXW9Q5XUX1 488 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 BCL2L2Q92843 193 aaPredicted RBP12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 OPA3Q9H6K4 179 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 OR14J1Q9UGF5 321 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 RNF115Q9Y4L5 304 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 ZNF705GA8MUZ8 300 aaPredicted RBP12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 OR2H2O95918 312 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
SLC39A1-204ENST00000368623 IGLV2-14P01704 120 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms