RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 ZDHHC11Q9H8X9 412 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 HES4Q9HCC6 221 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 TMEM242Q9NWH2 141 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 GNG13Q9P2W3 67 aa12.07□□□□□ -0.48
CD48-201ENST00000368045 TGOLN2O43493 480 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 KIAA0141Q14154 515 aaPredicted RBP12.06□□□□□ -0.48
CD48-201ENST00000368045 ELOBQ15370 118 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 IZUMO4Q1ZYL8 232 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 ZNF766Q5HY98 468 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 INO80CQ6PI98 192 aaPredicted RBP12.06□□□□□ -0.48
CD48-201ENST00000368045 HAPLN4Q86UW8 402 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 ZNF645Q8N7E2 425 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 TCTEX1D1Q8N7M0 179 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 TMEM178AQ8NBL3 297 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 OR13D1Q8NGV5 346 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 RSG1Q9BU20 258 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 OR2J1Q9GZK6 312 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 WDR61Q9GZS3 305 aaKnown RBP12.06□□□□□ -0.48
CD48-201ENST00000368045 TOLLIPQ9H0E2 274 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 DEFB127Q9H1M4 99 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 SPRR3Q9UBC9 169 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 OR14J1Q9UGF5 321 aa12.06□□□□□ -0.48
CD48-201ENST00000368045 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
CD48-201ENST00000368045 WDR1O75083 606 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
CD48-201ENST00000368045 HAND1O96004 215 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 FBP1P09467 338 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 ZNF16P17020 682 aaPredicted RBP12.05□□□□□ -0.48
CD48-201ENST00000368045 HOXA5P20719 270 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 ARL16Q0P5N6 197 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 ATP6V1FQ16864 119 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 FAM90A2PQ658T7 463 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 SLC35E4Q6ICL7 350 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 TMEM14EPQ6UXP3 125 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 SLC16A13Q7RTY0 426 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 MRGPRGQ86SM5 289 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 FGFRL1Q8N441 504 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 PRR18Q8N4B5 295 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
CD48-201ENST00000368045 VAX2Q9UIW0 290 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 FREM1Q5H8C1 2179 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 ZNF727A8MUV8 499 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 CDIPTO14735 213 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 SPINK2P20155 84 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 TUBG1P23258 451 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 TNFRSF9Q07011 255 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 SLC38A11Q08AI6 406 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 PLA2G2CQ5R387 149 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 CENPVQ7Z7K6 275 aaPredicted RBP12.05□□□□□ -0.48
CD48-201ENST00000368045 ZNF610Q8N9Z0 462 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 SLC25A40Q8TBP6 338 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 Q8WTZ3 238 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 BCL2L14Q9BZR8 327 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
CD48-201ENST00000368045 C1QTNF9BB2RNN3 333 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 CLN5O75503 358 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 TNFSF15O95150 251 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 FABP1P07148 127 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 P0C879 139 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 SP9P0CG40 484 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 RND2P52198 227 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 SOX8P57073 446 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 RAB11AP62491 216 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 CATR1Q13166 79 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 CA5BP1Q8WTZ4 195 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
CD48-201ENST00000368045 GALMQ96C23 342 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 OR4C12Q96R67 309 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 OR51M1Q9H341 326 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 NIT2Q9NQR4 276 aa12.04□□□□□ -0.48
CD48-201ENST00000368045 OOEPA6NGQ2 149 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 ZNF891A8MT65 544 aaPredicted RBP12.03□□□□□ -0.48
CD48-201ENST00000368045 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 CELA3BP08861 270 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 IGHV1-2P23083 117 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 S100PP25815 95 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 IDH3GP51553 393 aaPredicted RBP12.03□□□□□ -0.48
CD48-201ENST00000368045 ARG2P78540 354 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 PSG7Q13046 419 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 EIF4EBP1Q13541 118 aaPredicted RBP12.03□□□□□ -0.48
CD48-201ENST00000368045 ZNF674Q2M3X9 581 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 SPANXN5Q5MJ07 72 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 LCN15Q6UWW0 184 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 MYPOPQ86VE0 399 aaPredicted RBP12.03□□□□□ -0.48
CD48-201ENST00000368045 ZNF665Q9H7R5 613 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 CLCF1Q9UBD9 225 aa12.03□□□□□ -0.48
CD48-201ENST00000368045 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 ZFP92A6NM28 416 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 CYB5R3P00387 301 aaPredicted RBP12.02□□□□□ -0.48
CD48-201ENST00000368045 MBP02144 154 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.48
CD48-201ENST00000368045 IGFBP7Q16270 282 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 RNFT1Q5M7Z0 435 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 Q6ZT83 130 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms