RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 ZNF880Q6PDB4 577 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 SLC25A48Q6ZT89 311 aaKnown RBP11.7□□□□□ -0.54
SF3B5-201ENST00000367569 MOB1BQ7L9L4 216 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 GALMQ96C23 342 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 RANBP3Q9H6Z4 567 aaPredicted RBP11.7□□□□□ -0.54
SF3B5-201ENST00000367569 ABRACLQ9P1F3 81 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 SLC23A1Q9UHI7 598 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
SF3B5-201ENST00000367569 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
SF3B5-201ENST00000367569 RAB27BO00194 218 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 CD3GP09693 182 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 HIST1H1DP16402 221 aaKnown RBP11.69□□□□□ -0.54
SF3B5-201ENST00000367569 RAB6AP20340 208 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 IL3RAP26951 378 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 RAB7AP51149 207 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 NCS1P62166 190 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 LINC00311Q8N616 119 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 FAM110DQ8TAY7 271 aaPredicted RBP11.69□□□□□ -0.54
SF3B5-201ENST00000367569 RTN4IP1Q8WWV3 396 aaPredicted RBP11.69□□□□□ -0.54
SF3B5-201ENST00000367569 OCSTAMPQ9BR26 566 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
SF3B5-201ENST00000367569 Q9N2K0 584 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 RAB9BQ9NP90 201 aa11.69□□□□□ -0.54
SF3B5-201ENST00000367569 SAA2-SAA4A0A096LPE2 208 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 IGKV1-6A0A0C4DH72 117 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 OR2F2O95006 317 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 GAPDHP04406 335 aaKnown RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 LPLP06858 475 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 FCGR3AP08637 254 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 SAA2P0DJI9 122 aaPredicted RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 VDAC2P45880 294 aaPredicted RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 MRPS15P82914 257 aaKnown RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 ARFRP1Q13795 201 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 SLC16A12Q6ZSM3 486 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 TPRA1Q86W33 373 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 TGIF2LXQ8IUE1 241 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 ODF3L1Q8IXM7 274 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 OR8H3Q8N146 312 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 DTX3Q8N9I9 347 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 OR2AK2Q8NG84 335 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 NUDCD2Q8WVJ2 157 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 SLC25A38Q96DW6 304 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 RBM14Q96PK6 669 aaKnown RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 PRSS22Q9GZN4 317 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 NAA50Q9GZZ1 169 aaKnown RBP11.68□□□□□ -0.54
SF3B5-201ENST00000367569 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 SERTAD4Q9NUC0 356 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 RHBDL2Q9NX52 303 aa11.68□□□□□ -0.54
SF3B5-201ENST00000367569 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 TRIM64CA6NLI5 447 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 HSPA12AO43301 675 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 AMY1AP04745 511 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 AMY2AP04746 511 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 KIR2DS4P43632 304 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 HERPUD1Q15011 391 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 ABHD14BQ96IU4 210 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 FUNDC2Q9BWH2 189 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 MOB4Q9Y3A3 225 aa11.67□□□□□ -0.54
SF3B5-201ENST00000367569 TRBV6-6A0A0A6YYG2 114 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 METTL21EPA6NDL7 271 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 BET1O15155 118 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 FCER2P06734 321 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 FAM106CPP0CH98 169 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 PTHLHP12272 177 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 SERPINB10P48595 397 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 VBP1P61758 197 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 HTD2P86397 168 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 C2orf68Q2NKX9 166 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 TIMM50Q3ZCQ8 353 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 IGSF11Q5DX21 431 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 GLDNQ6ZMI3 551 aaPredicted RBP11.66□□□□□ -0.54
SF3B5-201ENST00000367569 ZNF554Q86TJ5 538 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
SF3B5-201ENST00000367569 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
SF3B5-201ENST00000367569 FAM90A9PA6NNJ1 464 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 FABP7O15540 132 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 YPEL1O60688 119 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 PEX14O75381 377 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 RGS11O94810 467 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 CSF1P09603 554 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 GSTT2P0CG29 244 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 GSTT2BP0CG30 244 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 CD28P10747 220 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 RPS19P39019 145 aaKnown RBP11.65□□□□□ -0.54
SF3B5-201ENST00000367569 LSAMPQ13449 338 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 CDNFQ49AH0 187 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 Q8N2B8 174 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 OR13F1Q8NGS4 319 aa11.65□□□□□ -0.54
SF3B5-201ENST00000367569 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms