RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZNF671Q8TAW3 534 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 ZNF418Q8TF45 676 aaPredicted RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 SECTM1Q8WVN6 248 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 SLAMF9Q96A28 289 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 FUNDC2Q9BWH2 189 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 SUCNR1Q9BXA5 334 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DPAGT1Q9H3H5 408 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 RBFOX1Q9NWB1 397 aaKnown RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 CKLFQ9UBR5 152 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4Q9UBX2 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 ZNF222Q9UK12 451 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 NUP50Q9UKX7 468 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 POLDIP2Q9Y2S7 368 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 AK6Q9Y3D8 172 aaKnown RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 PKD1L1Q8TDX9 2849 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 IGKV1D-17A0A075B6S4 117 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 LOC100506127A0A0U1RQW1 187 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 ENSAO43768 121 aaKnown RBP6.3□□□□□ -1.4
YBX3-204ENST00000366290 GPR137BO60478 399 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 ARL6IP5O75915 188 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 CDRT1O95170 752 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 GYPAP02724 150 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 PSG2P11465 335 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 GLRA1P23415 457 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 PTGFRP43088 359 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 SAXO1Q8IYX7 474 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 LY6G5BQ8NDX9 201 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 OR5T2Q8NGG2 359 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 OR10K1Q8NGX5 313 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 ANGPTL6Q8NI99 470 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 C8orf46Q8TAG6 207 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 TNFAIP8L1Q8WVP5 186 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 CEP19Q96LK0 163 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 EXOSC4Q9NPD3 245 aaKnown RBP6.3□□□□□ -1.4
YBX3-204ENST00000366290 SSR3Q9UNL2 185 aa6.3□□□□□ -1.4
YBX3-204ENST00000366290 SMIM30A4D0T7 59 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 RFPL4AA6NLU0 287 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 OR2AT4A6NND4 320 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 RFPL4AL1F8VTS6 287 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 CLDN34H7C241 214 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 SLC17A2O00624 439 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 SLC22A1O15245 554 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 MAGEB3O15480 346 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 AIREO43918 545 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 NXPH2O95156 264 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 GABARAPO95166 117 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 OCMP0CE72 109 aaPredicted RBP6.29□□□□□ -1.4
YBX3-204ENST00000366290 CALCBP10092 127 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 SDC2P34741 201 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 RPL5P46777 297 aaKnown RBP6.29□□□□□ -1.4
YBX3-204ENST00000366290 CEBPDP49716 269 aaPredicted RBP6.29□□□□□ -1.4
YBX3-204ENST00000366290 CAV3P56539 151 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 FGF12P61328 243 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 NCS1P62166 190 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 LSM3P62310 102 aaKnown RBP6.29□□□□□ -1.4
YBX3-204ENST00000366290 QRFPP83859 136 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 KRBOX4Q5JUW0 171 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 CST9LP1Q5W188 147 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 ELP2Q6IA86 826 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 GDPGP1Q6ZNW5 385 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 SLC36A1Q7Z2H8 476 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 MKXQ8IYA7 352 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 FGFRL1Q8N441 504 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 JAGN1Q8N5M9 183 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 CD177Q8N6Q3 437 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 EMG1Q92979 244 aaKnown RBP6.29□□□□□ -1.4
YBX3-204ENST00000366290 CYYR1Q96J86 154 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 KCTD7Q96MP8 289 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 GAFA1Q96PS6 74 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 GPER1Q99527 375 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 SLC6A7Q99884 636 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 UQCC2Q9BRT2 126 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 NEK6Q9HC98 313 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 HMG20AQ9NP66 347 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 RASL12Q9NYN1 266 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 IL36GQ9NZH8 169 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 ZNF581Q9P0T4 197 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
YBX3-204ENST00000366290 GSTK1Q9Y2Q3 226 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 MAB21L2Q9Y586 359 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 MGAM2Q2M2H8 2515 aa6.29□□□□□ -1.4
YBX3-204ENST00000366290 A0A0B4J203 849 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 TEX13DA0A0J9YY54 714 aaPredicted RBP6.28□□□□□ -1.4
YBX3-204ENST00000366290 IFITM5A6NNB3 132 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 ZNF737O75373 536 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 SNRNP70P08621 437 aaKnown RBP6.28□□□□□ -1.4
YBX3-204ENST00000366290 IGHV4-38-2P0DP08 117 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 PRKACAP17612 351 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 RAB3BP20337 219 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 MYL9P24844 172 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 CLDN12P56749 244 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 VBP1P61758 197 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 PNRC1Q12796 327 aaPredicted RBP6.28□□□□□ -1.4
YBX3-204ENST00000366290 UNC119Q13432 240 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 ZNF146Q15072 292 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 DGUOKQ16854 277 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 SMIM21Q3B7S5 101 aa6.28□□□□□ -1.4
YBX3-204ENST00000366290 TIMM50Q3ZCQ8 353 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms