RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 PIK3C2AO00443 1686 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 RPS27P42677 84 aaKnown RBP7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 RTN4RL1Q86UN2 441 aaPredicted RBP7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 SLC25A40Q8TBP6 338 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 NPIPB8E9PQR5 432 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 NPIPB9F8W1W9 429 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 PRKNO60260 465 aaPredicted RBP7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 NPIPB7O75200 414 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 AURKAIP1Q9NWT8 199 aaPredicted RBP7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 FAM208BQ5VWN6 2430 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 TRAV8-4A0A0B4J246 113 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 GJB3O75712 270 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 CDK2AP2O75956 126 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 SRSF6Q13247 344 aaKnown RBP7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 SPNS2Q8IVW8 549 aa7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 TBL2Q9Y4P3 447 aaKnown RBP7.42□□□□□ -1.22
NCKAP1-202ENST00000361354 OLIG3Q7RTU3 272 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 RGP1Q92546 391 aaPredicted RBP7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TRGC2P03986 189 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 RPS4XP62701 263 aaKnown RBP7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SLC37A2Q8TED4 501 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 KLK15Q9H2R5 256 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 NPPBP16860 134 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 FOXF1Q12946 379 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SCD5Q86SK9 330 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 IGHV3-20A0A0C4DH32 117 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TSPAN2O60636 221 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 CNTFRP26992 372 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SBK3P0C264 359 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 MRGPRFQ96AM1 343 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 KDM3BQ7LBC6 1761 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 BADQ92934 168 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 THADAQ6YHU6 1953 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SONP18583 2426 aaKnown RBP7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 HSPB1P04792 205 aaKnown RBP7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 ANOS1P23352 680 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 VKORC1L1Q8N0U8 176 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 COL11A1P12107 1806 aaPredicted RBP7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SRIP30626 198 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TCTN3Q6NUS6 607 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 OR5AN1Q8NGI8 311 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 DNASE2BQ8WZ79 361 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 CXXC4Q9H2H0 198 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 ARFGEF1Q9Y6D6 1849 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 ZFPL1O95159 310 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 EPPINO95925 133 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TIMP1P01033 207 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 DDB2Q92466 427 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TOX2Q96NM4 488 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 CRYBB2P43320 205 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 OR51B2Q9Y5P1 312 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 H7C1H1 209 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 CXCL13O43927 109 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SELENOTP62341 195 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 TSPO2Q5TGU0 170 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 OR4A5Q8NH83 315 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 RFESDQ8TAC1 157 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 ZNF83P51522 516 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 GFRA1P56159 465 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 SOSTQ9BQB4 213 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 MTCH2Q9Y6C9 303 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 PGLYRP4Q96LB8 373 aa7.41□□□□□ -1.22
NCKAP1-202ENST00000361354 HBBP68871 147 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 CTAG1AP78358 180 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 EWSR1Q01844 656 aaKnown RBP eCLIP7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 TMEM170BQ5T4T1 132 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 SLC25A2Q9BXI2 301 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 PTPRDP23468 1912 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 SNAI1O95863 264 aaPredicted RBP7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 TMEM160Q9NX00 188 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 SSC5DA1L4H1 1573 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 PSMB11A5LHX3 300 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 FGF17O60258 216 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 MRPS11P82912 194 aaKnown RBP7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 GFRALQ6UXV0 394 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 NUDT8Q8WV74 236 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 PCGF1Q9BSM1 259 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 MC5RP33032 325 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 MS4A7Q9GZW8 240 aaPredicted RBP7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 C1orf220Q5T0J3 134 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 NCOA6Q14686 2063 aaPredicted RBP7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 A0A1W2PR48 441 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 PAX2Q02962 417 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 NEU1Q99519 415 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 HOXA5P20719 270 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 TSPOP30536 169 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 GAPTQ8N292 157 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 TANC2Q9HCD6 1990 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 ALG1L2C9J202 215 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 SYNGR1O43759 233 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 GALNSP34059 522 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 FAM53BQ14153 422 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 RNF122Q9H9V4 155 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 MPC1Q9Y5U8 109 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 ZNF275Q9NSD4 429 aaPredicted RBP7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 A0A0B4J2E0 115 aa7.4□□□□□ -1.22
NCKAP1-202ENST00000361354 A0A1B0GX12 115 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms