RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 COL24A1Q17RW2 1714 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 A0A1W2PP11 408 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 TSPAN2O60636 221 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 CST4P01036 141 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 ABHD12Q8N2K0 398 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 CBY3A6NI87 242 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 OR4C46A6NHA9 309 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 PGA4P0DJD7 388 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 Q6ZNX1 250 aa17.54■□□□□ 0.4
CDC42BPB-201ENST00000361246 SNRNP200O75643 2136 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 CEACAM18A8MTB9 384 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 ZNF680Q8NEM1 530 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 KLF14Q8TD94 323 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 GPA33Q99795 319 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 PTBP3O95758 552 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 IL13RA2Q14627 380 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 ZNF880Q6PDB4 577 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 LPAR3Q9UBY5 353 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 RBM11P57052 281 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 DNASE2BQ8WZ79 361 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 DDB2Q92466 427 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 VAMP8Q9BV40 100 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 SSX8Q7RTT4 187 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 A0A0G2JMM0 328 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 A0A1W2PPB8 328 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 A0A1W2PRS3 328 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 KIR3DP1A8MWS1 328 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 MELTFP08582 738 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 CEACAM21Q3KPI0 293 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 PTX4Q96A99 478 aa17.53■□□□□ 0.4
CDC42BPB-201ENST00000361246 PAGE4O60829 102 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 RPL27AP46776 148 aaKnown RBP17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 ABCA7Q8IZY2 2146 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 AKIP1Q9NQ31 210 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 SUCLG1P53597 346 aaKnown RBP17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 P2RY6Q15077 328 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 AANATQ16613 207 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 SCGB1D4Q6XE38 83 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 GBGT1Q8N5D6 347 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 IL36RNQ9UBH0 155 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 PHOX2AO14813 284 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 TGFAP01135 160 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 SSTR5P35346 364 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 ATP5G2Q06055 141 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 ZNF273Q14593 569 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 H3BVH4 76 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 KIR3DL2P43630 455 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 B2MP61769 119 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 PMS2P11Q13670 270 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 TMEM255AQ5JRV8 349 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 FAM162BQ5T6X4 162 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 AMMECR1LQ6DCA0 310 aa17.52■□□□□ 0.4
CDC42BPB-201ENST00000361246 PRSS53Q2L4Q9 553 aa17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 ANKRD20A5PA0PJZ0 165 aa17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 LEUTXA8MZ59 168 aa17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 C4orf51C9J302 202 aa17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 INHBBP09529 407 aa17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 KHDC3LQ587J8 217 aa17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 DMKNQ6E0U4 476 aaPredicted RBP17.52■□□□□ 0.39
CDC42BPB-201ENST00000361246 HOXD4P09016 255 aaPredicted RBP17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 BSPH1Q075Z2 132 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 GABRA6Q16445 453 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 PPP1R32Q7Z5V6 425 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 SGK494Q96LW2 274 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 CHST5Q9GZS9 411 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 NSUN5P1Q3KNT7 163 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 SLC25A42Q86VD7 318 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 TIMP4Q99727 224 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 BTF3P20290 206 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 C1orf174Q8IYL3 243 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 RPS4Y2Q8TD47 263 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 CEACAM1P13688 526 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 FAM24BQ8N5W8 94 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 FAM168AQ92567 244 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 POM121Q96HA1 1249 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 MIOXQ9UGB7 285 aa17.51■□□□□ 0.39
CDC42BPB-201ENST00000361246 MAP1BP46821 2468 aaKnown RBP17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 HNRNPA3P51991 378 aaKnown RBP17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 TMEM167BQ9NRX6 74 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 CTSDP07339 412 aaPredicted RBP17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 VSIG8P0DPA2 414 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 MMP26Q9NRE1 261 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 PILRAQ9UKJ1 303 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 IGHV3OR16-8A0A075B7F1 116 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 H7C2G1 150 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 TTRP02766 147 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 KLF9Q13886 244 aaPredicted RBP17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 TEPPQ6URK8 271 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 CALYQ9NYX4 217 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 PAXXQ9BUH6 204 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 ICE1Q9Y2F5 2266 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 WNT9BO14905 357 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 ADAM11O75078 769 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 MPV17P39210 176 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 DHRS11Q6UWP2 260 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 Q6ZN92 141 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 IDI2-AS1Q9NZ38 188 aa17.5■□□□□ 0.39
CDC42BPB-201ENST00000361246 GCSHP23434 173 aa17.49■□□□□ 0.39
CDC42BPB-201ENST00000361246 RNF133Q8WVZ7 376 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms