RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 WDYHV1Q96HA8 205 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 FER1L6-AS2Q96M78 137 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 CDH20Q9HBT6 801 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 TMEM9BQ9NQ34 198 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 RPRMQ9NS64 109 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 CHD3Q12873 2000 aaKnown RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 A0A087WWC5 75 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 SELEP16581 610 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 CEACAM6P40199 344 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 CEBPDP49716 269 aaPredicted RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 UBE2NP61088 152 aaKnown RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 ERVK11-1P61568 191 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 ARL16Q0P5N6 197 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 MRPL49Q13405 166 aaKnown RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 ZNF585BQ52M93 769 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 ATP1A1-AS1Q5TC04 95 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 LCN15Q6UWW0 184 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 C1QL4Q86Z23 238 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 DRAM1Q8N682 238 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 ZNF525Q8N782 197 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 ZNF251Q9BRH9 671 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 HIPK2Q9H2X6 1198 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 VSIRQ9H7M9 311 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 ZNF665Q9H7R5 613 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 TRAV1-1A0A0B4J248 108 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 SH2D1BO14796 132 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 CLN5O75503 358 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 TNFSF15O95150 251 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 GRPP07492 148 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 PGA5P0DJD9 388 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 FGF8P55075 233 aaPredicted RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 RAB11AP62491 216 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 ARG2P78540 354 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 KIAA0141Q14154 515 aaPredicted RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 ALKBH6Q3KRA9 238 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 RNFT1Q5M7Z0 435 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 SPANXN5Q5MJ07 72 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 DHRS13Q6UX07 377 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 HAPLN4Q86UW8 402 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 SLC25A40Q8TBP6 338 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 Q8WTZ3 238 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 TCTEX1D2Q8WW35 142 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 SEBOXQ9HB31 216 aaPredicted RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 NIT2Q9NQR4 276 aa7.26□□□□□ -1.25
RFX3-202ENST00000358730 MBNL3Q9NUK0 354 aaKnown RBP7.26□□□□□ -1.25
RFX3-202ENST00000358730 UBE2L5PA0A1B0GUS4 154 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 J3QW42 95 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 LYZL6O75951 148 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 BCL2P10415 239 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 CD59P13987 128 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 CD200P41217 278 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 ELLP55199 621 aaPredicted RBP7.25□□□□□ -1.25
RFX3-202ENST00000358730 ELOBQ15370 118 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 NCMAPQ5T1S8 102 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 SLC35E3Q7Z769 313 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 GCNT2Q8N0V5 402 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 PSMG3Q9BT73 122 aaPredicted RBP7.25□□□□□ -1.25
RFX3-202ENST00000358730 USF3Q68DE3 2245 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 HAND1O96004 215 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 CXCL1P09341 107 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 HOXB1P14653 301 aaPredicted RBP7.25□□□□□ -1.25
RFX3-202ENST00000358730 ERVFRD-1P60508 538 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 ZNF146Q15072 292 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 ZNF726P1Q15940 193 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 ZNF674Q2M3X9 581 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 ZNF766Q5HY98 468 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 OR2B11Q5JQS5 317 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 SSX7Q7RTT5 188 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 RCC1LQ96I51 464 aaKnown RBP7.25□□□□□ -1.25
RFX3-202ENST00000358730 RNF150Q9ULK6 438 aa7.25□□□□□ -1.25
RFX3-202ENST00000358730 RNF212BA8MTL3 300 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 CLDN1O95832 211 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 EIF2S3P41091 472 aaKnown RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 PMP22Q01453 160 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 TGFBR3Q03167 851 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 HES3Q5TGS1 186 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 FIP1L1Q6UN15 594 aaKnown RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 TMPRSS7Q7RTY8 843 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 CXorf67Q86X51 503 aaPredicted RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 GMPPAQ96IJ6 420 aaPredicted RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 OR2D2Q9H210 308 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 SIRT7Q9NRC8 400 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 WIPI2Q9Y4P8 454 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 PSPNO60542 156 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 RAMP3O60896 148 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 FABP1P07148 127 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 RAC2P15153 192 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 IGHV1-2P23083 117 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 OR3A1P47881 315 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 SLC38A11Q08AI6 406 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 HNF4GQ14541 408 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 LRRC75BQ2VPJ9 315 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 FAM90A2PQ658T7 463 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 FGFRL1Q8N441 504 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 ZNF808Q8N4W9 903 aaPredicted RBP7.24□□□□□ -1.25
RFX3-202ENST00000358730 DEFB123Q8N688 67 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 ZNF645Q8N7E2 425 aa7.24□□□□□ -1.25
RFX3-202ENST00000358730 OR10G4Q8NGN3 311 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms