RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SRD5A2P31213 254 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 OR3A1P47881 315 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 UCP3P55916 312 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 MRGPRGQ86SM5 289 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 C17orf82Q86X59 251 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ZNF573Q86YE8 665 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 TGIF2LXQ8IUE1 241 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 OR2T10Q8NGZ9 312 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 APOBEC3DQ96AK3 386 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ACTR3CQ9C0K3 210 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 TWSG1Q9GZX9 223 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 LIN7CQ9NUP9 197 aaKnown RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ABI3Q9P2A4 366 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 TIMM8BQ9Y5J9 83 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ATP23Q9Y6H3 246 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ADAMTS9Q9P2N4 1935 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 HOXC12P31275 282 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 NTF4P34130 210 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 FGF12P61328 243 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 GNG3P63215 75 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 FOXO1Q12778 655 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 P2RY6Q15077 328 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 OR8B8Q15620 311 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 HIST3H3Q16695 136 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 FADS6Q8N9I5 356 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 M1APQ8TC57 530 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ABHD5Q8WTS1 349 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 HES7Q9BYE0 225 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 SERTAD4Q9NUC0 356 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 SIT1Q9Y3P8 196 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 TRAPPC1Q9Y5R8 145 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 IGHV1-45A0A0A0MS14 117 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 B4DEV8 164 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 H0Y980 276 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 COX5AP20674 150 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CRYGSP22914 178 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 UCP1P25874 307 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 PMELP40967 661 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 MEF2BQ02080 365 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 OR8G1Q15617 311 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 UNQ6494/PRO21346Q6UXR6 183 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 BAGE3Q86Y29 109 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 BAGE2Q86Y30 109 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CNEP1R1Q8N9A8 125 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 OR1P1Q8NH06 330 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 OR4X1Q8NH49 305 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 KCNE4Q8WWG9 221 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 GNG12Q9UBI6 72 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 EP300Q09472 2414 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 KIAA1324LA8MWY0 1029 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 FOSL1P15407 271 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CATR1Q13166 79 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 TRIM61Q5EBN2 209 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 TOMM20LQ6UXN7 152 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 LURAP1LQ8IV03 231 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 SPEM1Q8N4L4 309 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 LRTM2Q8N967 370 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 OR5D13Q8NGL4 314 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 MRGPRDQ8TDS7 321 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 C14orf144Q96I85 54 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 HIST1H2BLQ99880 126 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 SF3B5Q9BWJ5 86 aaKnown RBP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 TMEM9BQ9NQ34 198 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CBLN4Q9NTU7 201 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CADP27708 2225 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 IGLV3-12A0A075B6K2 115 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 A0A1B0GU03 582 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 FOXI3A8MTJ6 420 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 GYPAP02724 150 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 TFF1P04155 84 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CELA3AP09093 270 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 COX6A1P12074 109 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 THBS3P49746 956 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 ID3Q02535 119 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 Q6ZRM9 215 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 TMPRSS7Q7RTY8 843 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 REC114Q7Z4M0 266 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 GCNT2Q8N0V5 402 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 OR2Y1Q8NGV0 311 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 TAF15Q92804 592 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 PINX1Q96BK5 328 aaKnown RBP5.61□□□□□ -1.51
CSDE1-203ENST00000358528 PARLQ9H300 379 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 ZDHHC11Q9H8X9 412 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 DLL3Q9NYJ7 618 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 ZNF391Q9UJN7 358 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 CFAP54Q96N23 3096 aa5.61□□□□□ -1.51
CSDE1-203ENST00000358528 ZNF318Q5VUA4 2279 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 LRP5LA4QPB2 252 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 PGPEP1LA6NFU8 196 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 C11orf94C9JXX5 98 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 HAX1O00165 279 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 PPIHO43447 177 aaKnown RBP5.6□□□□□ -1.51
CSDE1-203ENST00000358528 KITLGP21583 273 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 MPLP40238 635 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 MAGEA5P43359 124 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 CASP6P55212 293 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 ZNF90Q03938 601 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 ARL16Q0P5N6 197 aa5.6□□□□□ -1.51
CSDE1-203ENST00000358528 MRPL49Q13405 166 aaKnown RBP5.6□□□□□ -1.51
CSDE1-203ENST00000358528 HERPUD1Q15011 391 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms