RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 APOA2P02652 100 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 CELA2AP08217 269 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 MDH2P40926 338 aaKnown RBP8.61□□□□□ -1.03
RNF40-202ENST00000357890 TCL1AP56279 114 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 MSMO1Q15800 293 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 EXT1Q16394 746 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 SPATA45Q537H7 98 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 MRPL21Q7Z2W9 205 aaKnown RBP8.61□□□□□ -1.03
RNF40-202ENST00000357890 CLEC18CQ8NCF0 446 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 R3HDM4Q96D70 268 aa8.61□□□□□ -1.03
RNF40-202ENST00000357890 CNOT1A5YKK6 2376 aaKnown RBP8.6□□□□□ -1.03
RNF40-202ENST00000357890 ZNHIT1O43257 154 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 CXCL13O43927 109 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 ZNF32P17041 273 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 MEF2BQ02080 365 aaPredicted RBP8.6□□□□□ -1.03
RNF40-202ENST00000357890 SNAI3Q3KNW1 292 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
RNF40-202ENST00000357890 AGBL5Q8NDL9 886 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 OR1L6Q8NGR2 347 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 DNASE2BQ8WZ79 361 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 SDF2L1Q9HCN8 221 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 NAT8BQ9UHF3 227 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 RAB29O14966 203 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 IER3P46695 156 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 GNB2P62879 340 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 IL24Q13007 206 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 KIAA1644Q3SXP7 199 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 ACTR3CQ9C0K3 210 aaPredicted RBP8.6□□□□□ -1.03
RNF40-202ENST00000357890 CCL28Q9NRJ3 127 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 SLC7A10Q9NS82 523 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 FAM157AC9JC47 383 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 SIRPB1O00241 398 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 EPHA8P29322 1005 aaPredicted RBP8.6□□□□□ -1.03
RNF40-202ENST00000357890 CEACAM16Q2WEN9 425 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 FFAR4Q5NUL3 377 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 OR5D13Q8NGL4 314 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 OR1F12Q8NHA8 337 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 PARLQ9H300 379 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 AKIRIN1Q9H9L7 192 aaPredicted RBP8.6□□□□□ -1.03
RNF40-202ENST00000357890 CLCF1Q9UBD9 225 aa8.6□□□□□ -1.03
RNF40-202ENST00000357890 A0A096LPE4 126 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 IGHV5-10-1A0A0J9YXX1 117 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 A0A1W2PPZ6 126 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 TRDCB7Z8K6 153 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 GDF1P27539 372 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 DSCR4P56555 118 aaPredicted RBP8.59□□□□□ -1.03
RNF40-202ENST00000357890 PDLIM3Q53GG5 364 aaPredicted RBP8.59□□□□□ -1.03
RNF40-202ENST00000357890 SLC25A53Q5H9E4 307 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 MKXQ8IYA7 352 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 ZNF738Q8NE65 137 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 ZCCHC14Q8WYQ9 949 aaKnown RBP8.59□□□□□ -1.03
RNF40-202ENST00000357890 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 RNF150Q9ULK6 438 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 RPH3ALQ9UNE2 315 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 CCL3P10147 92 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 CBLN1P23435 193 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 DUSP3P51452 185 aaPredicted RBP8.59□□□□□ -1.03
RNF40-202ENST00000357890 LHFPL2Q6ZUX7 228 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 OR10V1Q8NGI7 309 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 OR10G4Q8NGN3 311 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 OR10G9Q8NGN4 311 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 OR10G7Q8NGN6 311 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 NEIL1Q96FI4 390 aaPredicted RBP8.59□□□□□ -1.03
RNF40-202ENST00000357890 VSIRQ9H7M9 311 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 POLR3KQ9Y2Y1 108 aaPredicted RBP8.59□□□□□ -1.03
RNF40-202ENST00000357890 SIT1Q9Y3P8 196 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 THADAQ6YHU6 1953 aa8.59□□□□□ -1.03
RNF40-202ENST00000357890 TRAPPC2LH3BP13 241 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 CDS2O95674 445 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 IGHEP01854 428 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 FOLR3P41439 243 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 PCBD1P61457 104 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 SLC38A11Q08AI6 406 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 KLHDC1Q8N7A1 406 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 TMEM171Q8WVE6 324 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.04
RNF40-202ENST00000357890 SLC35E1Q96K37 410 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 ALKBH7Q9BT30 221 aaPredicted RBP8.59□□□□□ -1.04
RNF40-202ENST00000357890 GLRX2Q9NS18 164 aa8.59□□□□□ -1.04
RNF40-202ENST00000357890 NBASA2RRP1 2371 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 TRAV39A0A0B4J263 110 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 LNP1A1A4G5 178 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 C10orf142B7Z368 130 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 MRPL33O75394 65 aaKnown RBP8.58□□□□□ -1.04
RNF40-202ENST00000357890 EDDM3BP56851 147 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 PLP2Q04941 152 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 Q5PR19 223 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 DCAF10Q5QP82 559 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 C1orf194Q5T5A4 169 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 SPSB3Q6PJ21 355 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 Q6ZVH6 145 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 TMPRSS7Q7RTY8 843 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 PSMF1Q92530 271 aa8.58□□□□□ -1.04
RNF40-202ENST00000357890 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
RNF40-202ENST00000357890 LYRM2Q9NU23 88 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms