RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 BCL2P10415 239 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 NAT2P11245 290 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 WNT5AP41221 380 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 GUCA2BQ16661 112 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 PLPPR5Q32ZL2 321 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 OR4C12Q96R67 309 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 GPA33Q99795 319 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 NEURL2Q9BR09 285 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 PRDM14Q9GZV8 571 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 IGHV1-45A0A0A0MS14 117 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 C7orf77A4D0Y5 90 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 FAM90A26D6RGX4 464 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 ADRA2AP08913 450 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 MFAP4P55083 255 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 RPS4XP62701 263 aaKnown RBP5.62□□□□□ -1.51
UPF2-201ENST00000356352 RELQ04864 619 aaPredicted RBP5.62□□□□□ -1.51
UPF2-201ENST00000356352 PAPPA-AS1Q5QFB9 102 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 LYZL2Q7Z4W2 148 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 OR10AC1Q8NH08 325 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 TBX15Q96SF7 602 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 PKIBQ9C010 78 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 ZNF430Q9H8G1 570 aaPredicted RBP5.62□□□□□ -1.51
UPF2-201ENST00000356352 PXMP4Q9Y6I8 212 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 IGKV3-7A0A075B6H7 116 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 RNF224P0DH78 156 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 WNT2BQ93097 391 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 ADAT3Q96EY9 351 aaPredicted RBP5.62□□□□□ -1.51
UPF2-201ENST00000356352 C19orf24Q9BVV8 132 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 SMOC1Q9H4F8 434 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 IDI2-AS1Q9NZ38 188 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 FER1L6Q2WGJ9 1857 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 ABCA3Q99758 1704 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 MED19A0JLT2 244 aaPredicted RBP5.62□□□□□ -1.51
UPF2-201ENST00000356352 PMS2CLQ68D20 193 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 SAXO1Q8IYX7 474 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 MAP1LC3AQ9H492 121 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 TMEM140Q9NV12 185 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 RALYQ9UKM9 306 aaKnown RBP5.62□□□□□ -1.51
UPF2-201ENST00000356352 ITGB4P16144 1822 aa5.62□□□□□ -1.51
UPF2-201ENST00000356352 DIRC3C9JPN6 131 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 KBTBD11O94819 623 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 CYB5R3P00387 301 aaPredicted RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 CTSSP25774 331 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 ATP5IP56385 69 aaPredicted RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 TAS2R60P59551 318 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 RPL8P62917 257 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 ATP5G2Q06055 141 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 ADAMTS17Q8TE56 1095 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 UCN2Q96RP3 112 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 HSPB7Q9UBY9 170 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 MYO18AQ92614 2054 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 FAM181BA6NEQ2 426 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 HLA-DQA1P01909 254 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 ATP6V0CP27449 155 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 GFRA1P56159 465 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 IRF3Q14653 427 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 PMCHL1Q16048 86 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 ADAD2Q8NCV1 583 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 ZNF502Q8TBZ5 544 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 TMEM45BQ96B21 275 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 MRAP2Q96G30 205 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 A0A1W2PPV9 198 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 AMY1AP04745 511 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 TRGC1P0CF51 173 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 PF4V1P10720 104 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 PDLIM4P50479 330 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 NUBP1P53384 320 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 SRSF5Q13243 272 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 PQLC2Q6ZP29 291 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 C9orf62Q8N4C0 152 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 SFXN3Q9BWM7 321 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 FOXD3Q9UJU5 478 aaPredicted RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 SPAARA0A1B0GVQ0 90 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 LINC00862A6NCI5 91 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 DXOO77932 396 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 COX5BP10606 129 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 MPV17P39210 176 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 NMUP48645 174 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 ZNF137PP52743 207 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 PRSS8Q16651 343 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 IBA57Q5T440 356 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 C1QL3Q5VWW1 255 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 UNQ5815/PRO19632Q6UWF5 114 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 EEF1AKMT3Q96AZ1 226 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 RSG1Q9BU20 258 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 J3QW42 95 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 RBFOX2O43251 390 aaKnown RBP eCLIP5.61□□□□□ -1.51
UPF2-201ENST00000356352 CKS2P33552 79 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 REC114Q7Z4M0 266 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 LSM10Q969L4 123 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 CCL13Q99616 98 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 MRPL32Q9BYC8 188 aaKnown RBP5.61□□□□□ -1.51
UPF2-201ENST00000356352 FSCN3Q9NQT6 498 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 ELOVL5Q9NYP7 299 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 ST6GALNAC2Q9UJ37 374 aa5.61□□□□□ -1.51
UPF2-201ENST00000356352 KLK13Q9UKR3 277 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms