RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 LIN54Q6MZP7 749 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 C11orf87Q6NUJ2 197 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 MS4A15Q8N5U1 240 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 BPIFB6Q8NFQ5 453 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 OR2AK2Q8NG84 335 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 C4orf3Q8WVX3 66 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 Q96M66 194 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 KCTD7Q96MP8 289 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 YPEL2Q96QA6 119 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 HSPB9Q9BQS6 159 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 PLCXD1Q9NUJ7 323 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
CAPN3-204ENST00000356316 KIAA1456Q9P272 454 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 PSORS1C1Q9UIG5 152 aa8.35□□□□□ -1.07
CAPN3-204ENST00000356316 PSMB8P28062 276 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 PPP1CCP36873 323 aaKnown RBP8.34□□□□□ -1.07
CAPN3-204ENST00000356316 ECI1P42126 302 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 LUMP51884 338 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-204ENST00000356316 ACSM3Q53FZ2 586 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 LY6G6FQ5SQ64 297 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 GLT8D1Q68CQ7 371 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 NANOGP1Q8N7R0 232 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 OR11H1Q8NG94 326 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 SETD6Q8TBK2 473 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 MRPL30Q8TCC3 161 aaKnown RBP8.34□□□□□ -1.07
CAPN3-204ENST00000356316 IL1F10Q8WWZ1 152 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 UBE2E2Q96LR5 201 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 FAAP24Q9BTP7 215 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 MND1Q9BWT6 205 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 VCXQ9H320 206 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 CHMP1AQ9HD42 196 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-204ENST00000356316 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 WSB1Q9Y6I7 421 aa8.34□□□□□ -1.07
CAPN3-204ENST00000356316 TRAV41A0A0B4J266 112 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 PTGES3LE9PB15 166 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 NBR2O15453 112 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 OR8U8P0C7N1 319 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 CFHR3Q02985 330 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 GABPB1Q06547 395 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-204ENST00000356316 GNMTQ14749 295 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 PLGLAQ15195 96 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 RCN1Q15293 331 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 ZNF260Q3ZCT1 412 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 RBM48Q5RL73 367 aaKnown RBP8.33□□□□□ -1.08
CAPN3-204ENST00000356316 SIGIRRQ6IA17 410 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 KCNG3Q8TAE7 436 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 PHYHIPQ92561 330 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 NABP2Q9BQ15 211 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 TMED9Q9BVK6 235 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 OR51J1Q9H342 316 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 GHITMQ9H3K2 345 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 PARP11Q9NR21 331 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 PLEKHJ1Q9NW61 149 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 PIPOXQ9P0Z9 390 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 VSIG4Q9Y279 399 aa8.33□□□□□ -1.08
CAPN3-204ENST00000356316 H7C2Y5 167 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 RAB29O14966 203 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 LY86O95711 162 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 HLA-DRB1P01911 266 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 GSTP1P09211 210 aaKnown RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 GNAO1P09471 354 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 SRMP19623 302 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 HTR2CP28335 458 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 CD40LGP29965 261 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 BLVRBP30043 206 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 MC5RP33032 325 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 OR3A3P47888 321 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 RAB9AP51151 201 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 INSL3P51460 131 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 RPS27AP62979 156 aaKnown RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 TMEM267Q0VDI3 215 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 MED22Q15528 200 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 C5orf64Q2M2E5 130 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 HSD17B12Q53GQ0 312 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 C6orf201Q7Z4U5 140 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 CEACAM19Q7Z692 300 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 LYPD6Q86Y78 171 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 RBMXL1Q96E39 390 aaKnown RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 PRR25Q96S07 402 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 SULT4A1Q9BR01 284 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 TMEM59Q9BXS4 323 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 MRPL20Q9BYC9 149 aaKnown RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 ANKRD60Q9BZ19 345 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 RIMS4Q9H426 269 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-204ENST00000356316 SCN3BQ9NY72 215 aa8.32□□□□□ -1.08
CAPN3-204ENST00000356316 SAA2-SAA4A0A096LPE2 208 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 G3V318 75 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 ATP6V0E1O15342 81 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 HSPA12AO43301 675 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 CDK1P06493 297 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 SAA2P0DJI9 122 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-204ENST00000356316 CHATP28329 748 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
CAPN3-204ENST00000356316 RANBP1P43487 201 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 ZNF616Q08AN1 781 aa8.31□□□□□ -1.08
CAPN3-204ENST00000356316 C1orf100Q5SVJ3 147 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms