RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CST2P09228 141 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 LMO1P25800 156 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 MPLP40238 635 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 NUBP1P53384 320 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 ZIC4Q8N9L1 334 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 OR2H1Q9GZK4 316 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 TMEM38BQ9NVV0 291 aa11.62□□□□□ -0.55
TRIM4-203ENST00000355947 KIR2DS1A0A191URI9 304 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 TGOLN2O43493 480 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 FGF5P12034 268 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 KIR2DS4P43632 304 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 KIR2DS1Q14954 304 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 RPS19BP1Q86WX3 136 aaKnown RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 RPP25LQ8N5L8 163 aaKnown RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 RFESDQ8TAC1 157 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 WNT5BQ9H1J7 359 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 ZNF552Q9H707 407 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 PARD6AQ9NPB6 346 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 CHCHD2Q9Y6H1 151 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 TRAV38-1A0A0B4J264 116 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 LOC102725191A0A1B0GVB3 256 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 BCAT2O15382 392 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 SYNGR3O43761 229 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 CEACAM1P13688 526 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 CA6P23280 308 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 COL8A2P25067 703 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 CEBPDP49716 269 aaPredicted RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 TNFRSF9Q07011 255 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 PRR31Q5SQ13 230 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 MRGPRGQ86SM5 289 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 C12orf49Q9H741 205 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 CISD1Q9NZ45 108 aaKnown RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 SPTBN2O15020 2390 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 B4DEV8 164 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 M0R143 59 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 IGKV1D-33P01593 117 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 IGKV1-33P01594 117 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 RFPL3SP0C7P2 107 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 SSR4P51571 173 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 C3AR1Q16581 482 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 DPPA3Q6W0C5 159 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 CPEB3Q8NE35 698 aaKnown RBP11.61□□□□□ -0.55
TRIM4-203ENST00000355947 SRD5A3Q9H8P0 318 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 MTCH1Q9NZJ7 389 aa11.61□□□□□ -0.55
TRIM4-203ENST00000355947 MED12LQ86YW9 2145 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 A0A1W2PR77 199 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 MRPL33O75394 65 aaKnown RBP11.6□□□□□ -0.55
TRIM4-203ENST00000355947 P04436 131 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 CFIP05156 583 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 NXPH1P58417 271 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 ARF1P84077 181 aaKnown RBP11.6□□□□□ -0.55
TRIM4-203ENST00000355947 TFF3Q07654 80 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 IQCJQ1A5X6 159 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 OR10D3Q8NH80 312 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 MRPL37Q9BZE1 423 aaKnown RBP11.6□□□□□ -0.55
TRIM4-203ENST00000355947 ZDHHC11Q9H8X9 412 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 DEGS1O15121 323 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 RHBDL1O75783 438 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 NDUFB4O95168 129 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 GRPP07492 148 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 UCP1P25874 307 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 CD81P60033 236 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 KRTDAPP60985 99 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
TRIM4-203ENST00000355947 BAGE3Q86Y29 109 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 BAGE2Q86Y30 109 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 ZNF525Q8N782 197 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 PLPPR1Q8TBJ4 325 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 CCDC74BQ96LY2 380 aa11.6□□□□□ -0.55
TRIM4-203ENST00000355947 LILRA1O75019 489 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 C1QTNF9P0C862 333 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 CEACAM6P40199 344 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 CLDN15P56746 228 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 HIST1H3AP68431 136 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 TAF15Q92804 592 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRIM4-203ENST00000355947 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 RAB40CQ96S21 281 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 CDCA3Q99618 268 aaPredicted RBP11.59□□□□□ -0.55
TRIM4-203ENST00000355947 DECR2Q9NUI1 292 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 TMEM56-RWDD3S4R434 201 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 hCG_38984A0A1B0GV85 526 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 ZIC3O60481 467 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 CA11O75493 328 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 VAMP5O95183 116 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 KCNMB1Q16558 191 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 HIST3H3Q16695 136 aa11.59□□□□□ -0.55
TRIM4-203ENST00000355947 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms