RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 GFRA3O60609 400 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 FAM106CPP0CH98 169 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 SSX8Q7RTT4 187 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 KCNK7Q9Y2U2 307 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 TRAV20A0A0B4J274 112 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 CTXND1A0A1B0GTU2 59 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 DHRS7CA6NNS2 312 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 LMX1BO60663 402 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 CTSSP25774 331 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 ZNF658BQ4V348 819 aaPredicted RBP11.43□□□□□ -0.58
SCN8A-202ENST00000355133 HSD17B13Q7Z5P4 300 aaPredicted RBP11.43□□□□□ -0.58
SCN8A-202ENST00000355133 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 CGB1A6NKQ9 187 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 FCARP24071 287 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 MPV17P39210 176 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 ZNF79Q15937 498 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 C1orf174Q8IYL3 243 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 MRPL30Q8TCC3 161 aaKnown RBP11.43□□□□□ -0.58
SCN8A-202ENST00000355133 MARS2Q96GW9 593 aaKnown RBP11.43□□□□□ -0.58
SCN8A-202ENST00000355133 SNX22Q96L94 193 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 CEACAM18A8MTB9 384 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 H3BQ15 152 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 LGALSLQ3ZCW2 172 aaPredicted RBP11.43□□□□□ -0.58
SCN8A-202ENST00000355133 PRDM14Q9GZV8 571 aa11.43□□□□□ -0.58
SCN8A-202ENST00000355133 APCSP02743 223 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 FUT5Q11128 374 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 SLC25A53Q5H9E4 307 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 TMEM74BQ9NUR3 256 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 MRPS18AQ9NVS2 196 aaKnown RBP11.42□□□□□ -0.58
SCN8A-202ENST00000355133 NUP214P35658 2090 aaPredicted RBP11.42□□□□□ -0.58
SCN8A-202ENST00000355133 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 PGA5P0DJD9 388 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 OR10J1P30954 320 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 RUNX1Q01196 453 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 SLC25A47Q6Q0C1 308 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 PLAUP00749 431 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 ERGP11308 486 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 COX6A1P12074 109 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 SNAI3Q3KNW1 292 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 DNAJC13O75165 2243 aa11.42□□□□□ -0.58
SCN8A-202ENST00000355133 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 C7orf77A4D0Y5 90 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 C4orf51C9J302 202 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 PITX3O75364 302 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 ZNF735P0CB33 412 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 HIST1H1BP16401 226 aaKnown RBP11.41□□□□□ -0.58
SCN8A-202ENST00000355133 LIMS1P48059 325 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 SLC16A13Q7RTY0 426 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 SHISA5Q8N114 240 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 GCSAMQ8N6F7 178 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 WNT2BQ93097 391 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 GPX7Q96SL4 187 aaPredicted RBP11.41□□□□□ -0.58
SCN8A-202ENST00000355133 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 IL17BQ9UHF5 180 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 HSF4Q9ULV5 492 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 AP4M1O00189 453 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 TCTAP57738 103 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 C16orf92Q96LL3 132 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 CORTO00230 105 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 TWIST1Q15672 202 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 EBLN2Q6P2I7 272 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 MYOZ3Q8TDC0 251 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 WFDC6Q9BQY6 131 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 SRXN1Q9BYN0 137 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 RGPD4Q7Z3J3 1758 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 A0A1W2PQM1 296 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 HAX1O00165 279 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 GREM1O60565 184 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 ADIPOR1Q96A54 375 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 PXMP4Q9Y6I8 212 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 SLC35B1P78383 322 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 ZNF273Q14593 569 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 LY6EQ16553 131 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 IZUMO4Q1ZYL8 232 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 UNQ5815/PRO19632Q6UWF5 114 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 ZNF645Q8N7E2 425 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 PTX4Q96A99 478 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 ZMAT5Q9UDW3 170 aaKnown RBP11.41□□□□□ -0.58
SCN8A-202ENST00000355133 SHANK3Q9BYB0 1731 aa11.41□□□□□ -0.58
SCN8A-202ENST00000355133 KNTC1P50748 2209 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 PRR19A6NJB7 356 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 CLDN18P56856 261 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 IL36RNQ9UBH0 155 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 PCM1Q15154 2024 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 IGKV3D-15A0A087WSY6 115 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 B4DEV8 164 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 ISLRO14498 428 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 DEDDO75618 318 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 KIR2DL2P43627 348 aaPredicted RBP11.4□□□□□ -0.58
SCN8A-202ENST00000355133 DLX1P56177 255 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 OR8G5Q8NG78 346 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms