RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PKIBQ9C010 78 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 IFT22Q9H7X7 185 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 SPENQ96T58 3664 aaKnown RBP16.53■□□□□ 0.24
COL13A1-201ENST00000354547 UBE2CO00762 179 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 HMGB3O15347 200 aaKnown RBP16.53■□□□□ 0.24
COL13A1-201ENST00000354547 DFFBO76075 338 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 AGFG2O95081 481 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 KRASP01116 189 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 RAB2AP61019 212 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 HES3Q5TGS1 186 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF880Q6PDB4 577 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 GTF3AQ92664 365 aaKnown RBP16.53■□□□□ 0.24
COL13A1-201ENST00000354547 CABLES2Q9BTV7 478 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 OBP2BQ9NPH6 170 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 OR8U8P0C7N1 319 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 MMP9P14780 707 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF816Q0VGE8 651 aaPredicted RBP16.53■□□□□ 0.24
COL13A1-201ENST00000354547 ALKBH2Q6NS38 261 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 DRAM1Q8N682 238 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 TPRX1Q8N7U7 411 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 CNEP1R1Q8N9A8 125 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 MDS2Q8NDY4 140 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 UFSP2Q9NUQ7 469 aa16.53■□□□□ 0.24
COL13A1-201ENST00000354547 ICE1Q9Y2F5 2266 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 A0A1B0GW64 132 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 SMPD2O60906 423 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF674Q2M3X9 581 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF766Q5HY98 468 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF497Q6ZNH5 498 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 SSX7Q7RTT5 188 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 OR1L1Q8NH94 360 aa16.52■□□□□ 0.24
COL13A1-201ENST00000354547 UNKLQ9H9P5 680 aaKnown RBP16.52■□□□□ 0.24
COL13A1-201ENST00000354547 BTBD17A6NE02 478 aa16.52■□□□□ 0.23
COL13A1-201ENST00000354547 YIF1AO95070 293 aa16.52■□□□□ 0.23
COL13A1-201ENST00000354547 KDF1Q8NAX2 398 aaPredicted RBP16.52■□□□□ 0.23
COL13A1-201ENST00000354547 MUCL1Q96DR8 90 aa16.52■□□□□ 0.23
COL13A1-201ENST00000354547 TRBV6-6A0A0A6YYG2 114 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 RAMP3O60896 148 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 CXCL1P09341 107 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 OR3A1P47881 315 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 KIAA0141Q14154 515 aaPredicted RBP16.51■□□□□ 0.23
COL13A1-201ENST00000354547 HAPLN4Q86UW8 402 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 GP6Q9HCN6 339 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 TGIF2-C20orf24A0A0A6YYL0 155 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 CDX4O14627 284 aaPredicted RBP16.51■□□□□ 0.23
COL13A1-201ENST00000354547 SH2D1BO14796 132 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 PSPNO60542 156 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 LINC00205P59089 165 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 AESQ08117 197 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 PSG7Q13046 419 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 ZNF787Q6DD87 383 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 BTNL3Q6UXE8 466 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 FER1L6-AS2Q96M78 137 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 CACNA1HO95180 2353 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 UBE2L5PA0A1B0GUS4 154 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 LRP5LA4QPB2 252 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 CLDN1O95832 211 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 IFNA17P01571 189 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 MPV17P39210 176 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 OR8G1Q15617 311 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 SPINK9Q5DT21 86 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 ZNF506Q5JVG8 444 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 HEPN1Q6WQI6 88 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 FGFRL1Q8N441 504 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 Q8WTZ3 238 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 TVP23CQ96ET8 276 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 PLPPR2Q96GM1 343 aa16.51■□□□□ 0.23
COL13A1-201ENST00000354547 IGHV1-2P23083 117 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 G6PCP35575 357 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 ERVFRD-1P60508 538 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 BEND4Q6ZU67 534 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 OR52L2PQ8NGH6 319 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 SNIP1Q8TAD8 396 aaKnown RBP16.5■□□□□ 0.23
COL13A1-201ENST00000354547 POLDIP2Q9Y2S7 368 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 HBE1P02100 147 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 ZNF883P0CG24 379 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 SP9P0CG40 484 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 MRPL49Q13405 166 aaKnown RBP16.5■□□□□ 0.23
COL13A1-201ENST00000354547 ZNF525Q8N782 197 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 RBMXL1Q96E39 390 aaKnown RBP16.5■□□□□ 0.23
COL13A1-201ENST00000354547 OR2D2Q9H210 308 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 LIN7CQ9NUP9 197 aaKnown RBP16.5■□□□□ 0.23
COL13A1-201ENST00000354547 LAMA5O15230 3695 aa16.5■□□□□ 0.23
COL13A1-201ENST00000354547 AP4M1O00189 453 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 HSPB1P04792 205 aaKnown RBP16.49■□□□□ 0.23
COL13A1-201ENST00000354547 CD55P08174 381 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 CEACAM1P13688 526 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 NDUFA6P56556 154 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 ZNF726P1Q15940 193 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 LTC4SQ16873 150 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 RFESDQ8TAC1 157 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 OR4C12Q96R67 309 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 TRIB1Q96RU8 372 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 SMDT1Q9H4I9 107 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 TMEM9BQ9NQ34 198 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 TTC28Q96AY4 2481 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 IGHV3-43A0A0B4J1X8 118 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.49■□□□□ 0.23
COL13A1-201ENST00000354547 CLN5O75503 358 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 RBMXL2O75526 392 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms